Literature DB >> 16140522

Spike train metrics.

Jonathan D Victor1.   

Abstract

Quantifying similarity and dissimilarity of spike trains is an important requisite for understanding neural codes. Spike metrics constitute a class of approaches to this problem. In contrast to most signal-processing methods, spike metrics operate on time series of all-or-none events, and are, thus, particularly appropriate for extracellularly recorded neural signals. The spike metric approach can be extended to multineuronal recordings, mitigating the 'curse of dimensionality' typically associated with analyses of multivariate data. Spike metrics have been usefully applied to the analysis of neural coding in a variety of systems, including vision, audition, olfaction, taste and electric sense.

Mesh:

Year:  2005        PMID: 16140522      PMCID: PMC2713191          DOI: 10.1016/j.conb.2005.08.002

Source DB:  PubMed          Journal:  Curr Opin Neurobiol        ISSN: 0959-4388            Impact factor:   6.627


  53 in total

1.  The time-rescaling theorem and its application to neural spike train data analysis.

Authors:  Emery N Brown; Riccardo Barbieri; Valérie Ventura; Robert E Kass; Loren M Frank
Journal:  Neural Comput       Date:  2002-02       Impact factor: 2.026

2.  A unified approach to the study of temporal, correlational, and rate coding.

Authors:  S Panzeri; S R Schultz
Journal:  Neural Comput       Date:  2001-06       Impact factor: 2.026

3.  Information-theoretic analysis of neural coding.

Authors:  D H Johnson; C M Gruner; K Baggerly; C Seshagiri
Journal:  J Comput Neurosci       Date:  2001 Jan-Feb       Impact factor: 1.621

4.  Fast algorithm for the metric-space analysis of simultaneous responses of multiple single neurons.

Authors:  Dmitriy Aronov
Journal:  J Neurosci Methods       Date:  2003-04-15       Impact factor: 2.390

5.  Cooperation between area 17 neuron pairs enhances fine discrimination of orientation.

Authors:  Jason M Samonds; John D Allison; Heather A Brown; A B Bonds
Journal:  J Neurosci       Date:  2003-03-15       Impact factor: 6.167

6.  Chronic, multisite, multielectrode recordings in macaque monkeys.

Authors:  Miguel A L Nicolelis; Dragan Dimitrov; Jose M Carmena; Roy Crist; Gary Lehew; Jerald D Kralik; Steven P Wise
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-05       Impact factor: 11.205

7.  Tonotopic specialization of auditory coincidence detection in nucleus laminaris of the chick.

Authors:  Hiroshi Kuba; Rei Yamada; Iwao Fukui; Harunori Ohmori
Journal:  J Neurosci       Date:  2005-02-23       Impact factor: 6.167

8.  Detection sensitivity and temporal resolution of visual signals near absolute threshold in the salamander retina.

Authors:  E J Chichilnisky; F Rieke
Journal:  J Neurosci       Date:  2005-01-12       Impact factor: 6.167

9.  Decoding synapses.

Authors:  K Sen; J C Jorge-Rivera; E Marder; L F Abbott
Journal:  J Neurosci       Date:  1996-10-01       Impact factor: 6.167

10.  Measurement of temporal regularity of spike train responses in auditory nerve fibers of the green treefrog.

Authors:  D Lim; R R Capranica
Journal:  J Neurosci Methods       Date:  1994-06       Impact factor: 2.390

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  51 in total

1.  A metric space approach to the information channel capacity of spike trains.

Authors:  James B Gillespie; Conor J Houghton
Journal:  J Comput Neurosci       Date:  2010-10-23       Impact factor: 1.621

2.  Dynamic programming algorithms for comparing multineuronal spike trains via cost-based metrics and alignments.

Authors:  Jonathan D Victor; David H Goldberg; Daniel Gardner
Journal:  J Neurosci Methods       Date:  2006-12-15       Impact factor: 2.390

3.  Neural coding mechanisms for flow rate in taste-responsive cells in the nucleus of the solitary tract of the rat.

Authors:  Patricia M Di Lorenzo; Jonathan D Victor
Journal:  J Neurophysiol       Date:  2006-12-20       Impact factor: 2.714

4.  A classification method to distinguish cell-specific responses elicited by current pulses in hippocampal CA1 pyramidal cells.

Authors:  José Ambros-Ingerson; Lawrence M Grover; William R Holmes
Journal:  Neural Comput       Date:  2008-06       Impact factor: 2.026

5.  Spike train analysis toolkit: enabling wider application of information-theoretic techniques to neurophysiology.

Authors:  David H Goldberg; Jonathan D Victor; Esther P Gardner; Daniel Gardner
Journal:  Neuroinformatics       Date:  2009-05-28

6.  Studying spike trains using a van Rossum metric with a synapse-like filter.

Authors:  Conor Houghton
Journal:  J Comput Neurosci       Date:  2008-07-08       Impact factor: 1.621

7.  Quantifying neuronal network dynamics through coarse-grained event trees.

Authors:  Aaditya V Rangan; David Cai; David W McLaughlin
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-30       Impact factor: 11.205

8.  Taste coding in the parabrachial nucleus of the pons in awake, freely licking rats and comparison with the nucleus of the solitary tract.

Authors:  Michael S Weiss; Jonathan D Victor; Patricia M Di Lorenzo
Journal:  J Neurophysiol       Date:  2013-12-31       Impact factor: 2.714

9.  Odor-taste convergence in the nucleus of the solitary tract of the awake freely licking rat.

Authors:  Olga D Escanilla; Jonathan D Victor; Patricia M Di Lorenzo
Journal:  J Neurosci       Date:  2015-04-22       Impact factor: 6.167

10.  Ideal observer analysis of signal quality in retinal circuits.

Authors:  Robert G Smith; Narender K Dhingra
Journal:  Prog Retin Eye Res       Date:  2009-05-13       Impact factor: 21.198

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