Literature DB >> 18667703

Quantifying neuronal network dynamics through coarse-grained event trees.

Aaditya V Rangan1, David Cai, David W McLaughlin.   

Abstract

Animals process information about many stimulus features simultaneously, swiftly (in a few 100 ms), and robustly (even when individual neurons do not themselves respond reliably). When the brain carries, codes, and certainly when it decodes information, it must do so through some coarse-grained projection mechanism. How can a projection retain information about network dynamics that covers multiple features, swiftly and robustly? Here, by a coarse-grained projection to event trees and to the event chains that comprise these trees, we propose a method of characterizing dynamic information of neuronal networks by using a statistical collection of spatial-temporal sequences of relevant physiological observables (such as sequences of spiking multiple neurons). We demonstrate, through idealized point neuron simulations in small networks, that this event tree analysis can reveal, with high reliability, information about multiple stimulus features within short realistic observation times. Then, with a large-scale realistic computational model of V1, we show that coarse-grained event trees contain sufficient information, again over short observation times, for fine discrimination of orientation, with results consistent with recent experimental observation.

Mesh:

Year:  2008        PMID: 18667703      PMCID: PMC2504773          DOI: 10.1073/pnas.0804303105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  21 in total

1.  Stable propagation of synchronous spiking in cortical neural networks.

Authors:  M Diesmann; M O Gewaltig; A Aertsen
Journal:  Nature       Date:  1999-12-02       Impact factor: 49.962

2.  Fast propagation of firing rates through layered networks of noisy neurons.

Authors:  Mark C W van Rossum; Gina G Turrigiano; Sacha B Nelson
Journal:  J Neurosci       Date:  2002-03-01       Impact factor: 6.167

3.  On the transmission of rate code in long feedforward networks with excitatory-inhibitory balance.

Authors:  Vladimir Litvak; Haim Sompolinsky; Idan Segev; Moshe Abeles
Journal:  J Neurosci       Date:  2003-04-01       Impact factor: 6.167

4.  Response of neurons in the lateral intraparietal area during a combined visual discrimination reaction time task.

Authors:  Jamie D Roitman; Michael N Shadlen
Journal:  J Neurosci       Date:  2002-11-01       Impact factor: 6.167

5.  Cooperation between area 17 neuron pairs enhances fine discrimination of orientation.

Authors:  Jason M Samonds; John D Allison; Heather A Brown; A B Bonds
Journal:  J Neurosci       Date:  2003-03-15       Impact factor: 6.167

6.  Is it an animal? Is it a human face? Fast processing in upright and inverted natural scenes.

Authors:  Guillaume A Rousselet; Marc J-M Macé; Michèle Fabre-Thorpe
Journal:  J Vis       Date:  2003       Impact factor: 2.240

7.  Cooperative synchronized assemblies enhance orientation discrimination.

Authors:  Jason M Samonds; John D Allison; Heather A Brown; A B Bonds
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-19       Impact factor: 11.205

8.  Fast numerical methods for simulating large-scale integrate-and-fire neuronal networks.

Authors:  Aaditya V Rangan; David Cai
Journal:  J Comput Neurosci       Date:  2006-07-28       Impact factor: 1.621

9.  The variable discharge of cortical neurons: implications for connectivity, computation, and information coding.

Authors:  M N Shadlen; W T Newsome
Journal:  J Neurosci       Date:  1998-05-15       Impact factor: 6.167

10.  Speed and accuracy of olfactory discrimination in the rat.

Authors:  Naoshige Uchida; Zachary F Mainen
Journal:  Nat Neurosci       Date:  2003-10-19       Impact factor: 24.884

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  4 in total

Review 1.  Neuronal plasticity and thalamocortical sleep and waking oscillations.

Authors:  Igor Timofeev
Journal:  Prog Brain Res       Date:  2011       Impact factor: 2.453

2.  Coarse-grained event tree analysis for quantifying Hodgkin-Huxley neuronal network dynamics.

Authors:  Yi Sun; Aaditya V Rangan; Douglas Zhou; David Cai
Journal:  J Comput Neurosci       Date:  2011-05-20       Impact factor: 1.621

3.  Functional roles for synaptic-depression within a model of the fly antennal lobe.

Authors:  Aaditya V Rangan
Journal:  PLoS Comput Biol       Date:  2012-08-23       Impact factor: 4.475

4.  Signal transmission through elements of the cytoskeleton form an optimized information network in eukaryotic cells.

Authors:  B R Frieden; R A Gatenby
Journal:  Sci Rep       Date:  2019-04-16       Impact factor: 4.379

  4 in total

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