Literature DB >> 16139228

The let-7 MicroRNA family members mir-48, mir-84, and mir-241 function together to regulate developmental timing in Caenorhabditis elegans.

Allison L Abbott1, Ezequiel Alvarez-Saavedra, Eric A Miska, Nelson C Lau, David P Bartel, H Robert Horvitz, Victor Ambros.   

Abstract

The microRNA let-7 is a critical regulator of developmental timing events at the larval-to-adult transition in C. elegans. Recently, microRNAs with sequence similarity to let-7 have been identified. We find that doubly mutant animals lacking the let-7 family microRNA genes mir-48 and mir-84 exhibit retarded molting behavior and retarded adult gene expression in the hypodermis. Triply mutant animals lacking mir-48, mir-84, and mir-241 exhibit repetition of L2-stage events in addition to retarded adult-stage events. mir-48, mir-84, and mir-241 function together to control the L2-to-L3 transition, likely by base pairing to complementary sites in the hbl-1 3' UTR and downregulating hbl-1 activity. Genetic analysis indicates that mir-48, mir-84, and mir-241 specify the timing of the L2-to-L3 transition in parallel to the heterochronic genes lin-28 and lin-46. These results indicate that let-7 family microRNAs function in combination to affect both early and late developmental timing decisions.

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Year:  2005        PMID: 16139228      PMCID: PMC3969732          DOI: 10.1016/j.devcel.2005.07.009

Source DB:  PubMed          Journal:  Dev Cell        ISSN: 1534-5807            Impact factor:   12.270


  52 in total

1.  Two genetic circuits repress the Caenorhabditis elegans heterochronic gene lin-28 after translation initiation.

Authors:  Kathy Seggerson; Lingjuan Tang; Eric G Moss
Journal:  Dev Biol       Date:  2002-03-15       Impact factor: 3.582

2.  Functional genomic analysis of C. elegans chromosome I by systematic RNA interference.

Authors:  A G Fraser; R S Kamath; P Zipperlen; M Martinez-Campos; M Sohrmann; J Ahringer
Journal:  Nature       Date:  2000-11-16       Impact factor: 49.962

3.  The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans.

Authors:  B J Reinhart; F J Slack; M Basson; A E Pasquinelli; J C Bettinger; A E Rougvie; H R Horvitz; G Ruvkun
Journal:  Nature       Date:  2000-02-24       Impact factor: 49.962

4.  Regulatory mutations of mir-48, a C. elegans let-7 family MicroRNA, cause developmental timing defects.

Authors:  Ming Li; Matthew W Jones-Rhoades; Nelson C Lau; David P Bartel; Ann E Rougvie
Journal:  Dev Cell       Date:  2005-09       Impact factor: 12.270

5.  Use of high specific activity StarFire oligonucleotide probes to visualize low-abundance pre-mRNA splicing intermediates in S. pombe.

Authors:  M A Behlke; S A Dames; W H McDonald; K L Gould; E J Devor; J A Walder
Journal:  Biotechniques       Date:  2000-10       Impact factor: 1.993

6.  Ingestion of bacterially expressed dsRNAs can produce specific and potent genetic interference in Caenorhabditis elegans.

Authors:  L Timmons; D L Court; A Fire
Journal:  Gene       Date:  2001-01-24       Impact factor: 3.688

Review 7.  Control of developmental timing in animals.

Authors:  A E Rougvie
Journal:  Nat Rev Genet       Date:  2001-09       Impact factor: 53.242

8.  An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans.

Authors:  N C Lau; L P Lim; E G Weinstein; D P Bartel
Journal:  Science       Date:  2001-10-26       Impact factor: 47.728

9.  An extensive class of small RNAs in Caenorhabditis elegans.

Authors:  R C Lee; V Ambros
Journal:  Science       Date:  2001-10-26       Impact factor: 47.728

10.  Conservation of the sequence and temporal expression of let-7 heterochronic regulatory RNA.

Authors:  A E Pasquinelli; B J Reinhart; F Slack; M Q Martindale; M I Kuroda; B Maller; D C Hayward; E E Ball; B Degnan; P Müller; J Spring; A Srinivasan; M Fishman; J Finnerty; J Corbo; M Levine; P Leahy; E Davidson; G Ruvkun
Journal:  Nature       Date:  2000-11-02       Impact factor: 49.962

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  233 in total

Review 1.  microRNAs, the cell's Nepenthe: clearing the past during the maternal-to-zygotic transition and cellular reprogramming.

Authors:  Antonio J Giraldez
Journal:  Curr Opin Genet Dev       Date:  2010-05-06       Impact factor: 5.578

2.  The mevalonate pathway regulates microRNA activity in Caenorhabditis elegans.

Authors:  Zhen Shi; Gary Ruvkun
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-06       Impact factor: 11.205

Review 3.  MicroRNAs of parasites: current status and future perspectives.

Authors:  Quan Liu; Wenbin Tuo; Hongwei Gao; Xing-Quan Zhu
Journal:  Parasitol Res       Date:  2010-06-08       Impact factor: 2.289

4.  kin-19/casein kinase Iα has dual functions in regulating asymmetric division and terminal differentiation in C. elegans epidermal stem cells.

Authors:  Diya Banerjee; Xin Chen; Shin Yi Lin; Frank J Slack
Journal:  Cell Cycle       Date:  2010-12-01       Impact factor: 4.534

5.  High-throughput sequencing discovery of conserved and novel microRNAs in Chinese cabbage (Brassica rapa L. ssp. pekinensis).

Authors:  Fengde Wang; Libin Li; Lifeng Liu; Huayin Li; Yihui Zhang; Yingyin Yao; Zhongfu Ni; Jianwei Gao
Journal:  Mol Genet Genomics       Date:  2012-05-29       Impact factor: 3.291

6.  Casein kinase II promotes target silencing by miRISC through direct phosphorylation of the DEAD-box RNA helicase CGH-1.

Authors:  Amelia F Alessi; Vishal Khivansara; Ting Han; Mallory A Freeberg; James J Moresco; Patricia G Tu; Eric Montoye; John R Yates; Xantha Karp; John K Kim
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-15       Impact factor: 11.205

Review 7.  Lin28 and let-7 in cell metabolism and cancer.

Authors:  Liem H Nguyen; Hao Zhu
Journal:  Transl Pediatr       Date:  2015-01

8.  microRNA miR-14 acts to modulate a positive autoregulatory loop controlling steroid hormone signaling in Drosophila.

Authors:  Jishy Varghese; Stephen M Cohen
Journal:  Genes Dev       Date:  2007-08-30       Impact factor: 11.361

9.  Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs.

Authors:  J Graham Ruby; Alexander Stark; Wendy K Johnston; Manolis Kellis; David P Bartel; Eric C Lai
Journal:  Genome Res       Date:  2007-11-07       Impact factor: 9.043

Review 10.  Understanding the molecular basis of Alzheimer's disease using a Caenorhabditis elegans model system.

Authors:  Collin Y Ewald; Chris Li
Journal:  Brain Struct Funct       Date:  2009-12-11       Impact factor: 3.270

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