Literature DB >> 16116435

RNA splicing promotes translation and RNA surveillance.

Jayanthi P Gudikote1, J Saadi Imam, Ramon F Garcia, Miles F Wilkinson.   

Abstract

Aberrant mRNAs harboring premature termination codons (PTCs or nonsense codons) are degraded by the nonsense-mediated mRNA decay (NMD) pathway. mRNAs transcribed from genes that naturally acquire PTCs during lymphocyte development are strongly downregulated by PTCs. Here we show that a signal essential for this robust mRNA downregulatory response is efficient RNA splicing. Strong mRNA downregulation can be conferred on a poor NMD substrate by either strengthening its splicing signals or removing its weak introns. Efficient splicing also strongly promotes translation, providing a molecular explanation for enhanced NMD and suggesting that efficient splicing may have evolved to enhance both protein production and RNA surveillance. Our results suggest simple approaches for increasing protein expression from expression vectors and treating human genetic diseases caused by nonsense and frameshift mutations.

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Year:  2005        PMID: 16116435     DOI: 10.1038/nsmb980

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  41 in total

Review 1.  The exon junction complex as a node of post-transcriptional networks.

Authors:  Hervé Le Hir; Jérôme Saulière; Zhen Wang
Journal:  Nat Rev Mol Cell Biol       Date:  2015-12-16       Impact factor: 94.444

2.  Pregnancy-Associated Plasma Protein-aa Regulates Photoreceptor Synaptic Development to Mediate Visually Guided Behavior.

Authors:  Andrew H Miller; Hollis B Howe; Bryan M Krause; Scott A Friedle; Matthew I Banks; Brian D Perkins; Marc A Wolman
Journal:  J Neurosci       Date:  2018-05-08       Impact factor: 6.167

3.  An alternative branch of the nonsense-mediated decay pathway.

Authors:  Wai-Kin Chan; Lulu Huang; Jayanthi P Gudikote; Yao-Fu Chang; J Saadi Imam; James A MacLean; Miles F Wilkinson
Journal:  EMBO J       Date:  2007-03-15       Impact factor: 11.598

4.  Splicing remodels messenger ribonucleoprotein architecture via eIF4A3-dependent and -independent recruitment of exon junction complex components.

Authors:  Zuo Zhang; Adrian R Krainer
Journal:  Proc Natl Acad Sci U S A       Date:  2007-07-02       Impact factor: 11.205

5.  Nonsense codons trigger an RNA partitioning shift.

Authors:  Angela D Bhalla; Jayanthi P Gudikote; Jun Wang; Wai-Kin Chan; Yao-Fu Chang; O Renee Olivas; Miles F Wilkinson
Journal:  J Biol Chem       Date:  2008-12-17       Impact factor: 5.157

6.  Flexibility in the site of exon junction complex deposition revealed by functional group and RNA secondary structure alterations in the splicing substrate.

Authors:  Dennis M Mishler; Alexander B Christ; Joan A Steitz
Journal:  RNA       Date:  2008-10-24       Impact factor: 4.942

7.  Mechanism of escape from nonsense-mediated mRNA decay of human beta-globin transcripts with nonsense mutations in the first exon.

Authors:  Gabriele Neu-Yilik; Beate Amthor; Niels H Gehring; Sharif Bahri; Helena Paidassi; Matthias W Hentze; Andreas E Kulozik
Journal:  RNA       Date:  2011-03-09       Impact factor: 4.942

Review 8.  Assembly, disassembly and recycling: the dynamics of exon junction complexes.

Authors:  Fulvia Bono; Niels H Gehring
Journal:  RNA Biol       Date:  2011-01-01       Impact factor: 4.652

9.  Kaposi's sarcoma-associated herpesvirus ORF57 protein interacts with PYM to enhance translation of viral intronless mRNAs.

Authors:  James R Boyne; Brian R Jackson; Adam Taylor; Stuart A Macnab; Adrian Whitehouse
Journal:  EMBO J       Date:  2010-04-30       Impact factor: 11.598

10.  Frame-disrupting mutations elicit pre-mRNA accumulation independently of frame disruption.

Authors:  J Saadi Imam; Jayanthi P Gudikote; Wai-Kin Chan; Miles F Wilkinson
Journal:  Nucleic Acids Res       Date:  2009-12-09       Impact factor: 16.971

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