Literature DB >> 16115072

Improved transcriptional activators and their use in mis-expression traps in Arabidopsis.

Stephen Rutherford1, Federica Brandizzi, Helen Townley, Judith Craft, Yibing Wang, Ian Jepson, Alberto Martinez, Ian Moore.   

Abstract

The synthetic transcription factor LhG4 has been used in numerous mis-expression studies in plants. We show that the sequence encoding the LhG4 activation domain, derived from Saccharomyces cerevisiae GAL4, contains several cryptic polyadenylation signals in Arabidopsis. The GAL4-derived sequence was modified according to preferred Arabidopsis codon usage, generating LhG4AtO which was faithfully transcribed in Arabidopsis plants. In protoplasts, LhG4AtO achieved maximum transactivation of the pOp promoter with 10-fold less input DNA than LhG4. The same methods were used to compare 10 other LhG4 derivatives that carried alternative natural or synthetic activation domains. Lh214 and Lh314, which contain synthetic activation domains comprising trimers of a core acidic activation domain, directed threefold more GUS expression from the pOp promoter with 20-fold less input DNA than LhG4. In contrast, when expressed from the CaMV 35S promoter in transgenic plants carrying a pOp-GUS reporter, Lh214 and Lh314 yielded transformants with substantially lower GUS activities than other constructs including LhG4AtO and LhG4 which performed similarly. When incorporated into an enhancer-trapping vector, however, LhG4AtO and Lh314 yielded enhancer traps with approximately twice the frequency of LhG4, suggesting that the modified activation domains offer improved performance when expressed from weaker transcription signals. To increase the number of LhG4 patterns available for mis-expression studies, we describe a population of enhancer-trap lines obtained with LhG4AtO in a pOp-GUS background. We show that enhancer-trap lines can transactivate an unlinked pOp-green fluorescent protein (pOp-GFP) reporter in the pattern predicted by staining for GUS activity.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 16115072     DOI: 10.1111/j.1365-313X.2005.02486.x

Source DB:  PubMed          Journal:  Plant J        ISSN: 0960-7412            Impact factor:   6.417


  11 in total

Review 1.  Recombinational cloning with plant gateway vectors.

Authors:  Mansour Karimi; Ann Depicker; Pierre Hilson
Journal:  Plant Physiol       Date:  2007-12       Impact factor: 8.340

2.  Building blocks for plant gene assembly.

Authors:  Mansour Karimi; Annick Bleys; Rudy Vanderhaeghen; Pierre Hilson
Journal:  Plant Physiol       Date:  2007-10-26       Impact factor: 8.340

3.  ALTERED MERISTEM PROGRAM1 suppresses ectopic stem cell niche formation in the shoot apical meristem in a largely cytokinin-independent manner.

Authors:  Wenwen Huang; Delphine Pitorre; Olena Poretska; Christine Marizzi; Nikola Winter; Brigitte Poppenberger; Tobias Sieberer
Journal:  Plant Physiol       Date:  2015-02-11       Impact factor: 8.340

4.  A Comprehensive Toolkit for Inducible, Cell Type-Specific Gene Expression in Arabidopsis.

Authors:  Ann-Kathrin Schürholz; Vadir López-Salmerón; Zhenni Li; Joachim Forner; Christian Wenzl; Christophe Gaillochet; Sebastian Augustin; Amaya Vilches Barro; Michael Fuchs; Michael Gebert; Jan U Lohmann; Thomas Greb; Sebastian Wolf
Journal:  Plant Physiol       Date:  2018-07-19       Impact factor: 8.340

5.  Flexible tools for gene expression and silencing in tomato.

Authors:  Ana I Fernandez; Nicolas Viron; Moftah Alhagdow; Mansour Karimi; Matthew Jones; Ziva Amsellem; Adrien Sicard; Anna Czerednik; Gerco Angenent; Donald Grierson; Sean May; Graham Seymour; Yuval Eshed; Martine Lemaire-Chamley; Christophe Rothan; Pierre Hilson
Journal:  Plant Physiol       Date:  2009-10-07       Impact factor: 8.340

6.  KNOX lost the OX: the Arabidopsis KNATM gene defines a novel class of KNOX transcriptional regulators missing the homeodomain.

Authors:  Enrico Magnani; Sarah Hake
Journal:  Plant Cell       Date:  2008-04-08       Impact factor: 11.277

7.  Comparative analysis of non-autonomous effects of tasiRNAs and miRNAs in Arabidopsis thaliana.

Authors:  Felipe Fenselau de Felippes; Felix Ott; Detlef Weigel
Journal:  Nucleic Acids Res       Date:  2010-12-05       Impact factor: 16.971

8.  Effects on Plant Growth and Reproduction of a Peach R2R3-MYB Transcription Factor Overexpressed in Tobacco.

Authors:  Md Abdur Rahim; Francesca Resentini; Francesca Dalla Vecchia; Livio Trainotti
Journal:  Front Plant Sci       Date:  2019-10-18       Impact factor: 5.753

9.  The steroid-inducible pOp6/LhGR gene expression system is fast, sensitive and does not cause plant growth defects in rice (Oryza sativa).

Authors:  Marketa Samalova; Ian Moore
Journal:  BMC Plant Biol       Date:  2021-10-09       Impact factor: 4.215

10.  Spatio-temporal expression patterns of Arabidopsis thaliana and Medicago truncatula defensin-like genes.

Authors:  Mesfin Tesfaye; Kevin At Silverstein; Sumitha Nallu; Lin Wang; Christopher J Botanga; S Karen Gomez; Liliana M Costa; Maria J Harrison; Deborah A Samac; Jane Glazebrook; Fumiaki Katagiri; Jose F Gutierrez-Marcos; Kathryn A Vandenbosch
Journal:  PLoS One       Date:  2013-03-18       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.