Literature DB >> 16109771

Dissecting the genetic complexity of human 6p deletion syndromes by using a region-specific, phenotype-driven mouse screen.

Debora Bogani1, Catherine Willoughby, Jennifer Davies, Kulvinder Kaur, Ghazala Mirza, Anju Paudyal, Heather Haines, Richard McKeone, Matthew Cadman, Guido Pieles, Jürgen E Schneider, Shoumo Bhattacharya, Andrea Hardy, Patrick M Nolan, Nikos Tripodis, Michael J Depew, Ramya Chandrasekara, Gimara Duncan, Paul T Sharpe, Andy Greenfield, Paul Denny, Steve D M Brown, Jiannis Ragoussis, Ruth M Arkell.   

Abstract

Monosomy of the human chromosome 6p terminal region results in a variety of congenital malformations that include brain, craniofacial, and organogenesis abnormalities. To examine the genetic basis of these phenotypes, we have carried out an unbiased functional analysis of the syntenic region of the mouse genome (proximal Mmu13). A genetic screen for recessive mutations in this region recovered thirteen lines with phenotypes relevant to a variety of clinical conditions. These include two loci that cause holoprosencephaly, two that underlie anophthalmia, one of which also contributes to other craniofacial abnormalities such as microcephaly, agnathia, and palatogenesis defects, and one locus responsible for developmental heart and kidney defects. Analysis of heterozygous carriers of these mutations shows that a high proportion of these loci manifest with behavioral activity and sensorimotor deficits in the heterozygous state. This finding argues for the systematic, reciprocal phenotypic assessment of dominant and recessive mouse mutants. In addition to providing a resource of single gene mutants that model 6p-associated disorders, the work reveals unsuspected genetic complexity at this region. In particular, many of the phenotypes associated with 6p deletions can be elicited by mutation in one of a number of genes. This finding implies that phenotypes associated with contiguous gene deletion syndromes can result not only from dosage sensitivity of one gene in the region but also from the combined effect of monosomy for multiple genes that function within the same biological process.

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Year:  2005        PMID: 16109771      PMCID: PMC1194901          DOI: 10.1073/pnas.0500584102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  35 in total

1.  Genetic, physical, and phenotypic characterization of the Del(13)Svea36H mouse.

Authors:  R M Arkell; M Cadman; T Marsland; A Southwell; C Thaung; J R Davies; T Clay; C V Beechey; E P Evans; M A Strivens; S D Brown; P Denny
Journal:  Mamm Genome       Date:  2001-09       Impact factor: 2.957

2.  A systematic, genome-wide, phenotype-driven mutagenesis programme for gene function studies in the mouse.

Authors:  P M Nolan; J Peters; M Strivens; D Rogers; J Hagan; N Spurr; I C Gray; L Vizor; D Brooker; E Whitehill; R Washbourne; T Hough; S Greenaway; M Hewitt; X Liu; S McCormack; K Pickford; R Selley; C Wells; Z Tymowska-Lalanne; P Roby; P Glenister; C Thornton; C Thaung; J A Stevenson; R Arkell; P Mburu; R Hardisty; A Kiernan; A Erven; K P Steel; S Voegeling; J L Guenet; C Nickols; R Sadri; M Nasse; A Isaacs; K Davies; M Browne; E M Fisher; J Martin; S Rastan; S D Brown; J Hunter
Journal:  Nat Genet       Date:  2000-08       Impact factor: 38.330

3.  Genetic variation in the 22q11 locus and susceptibility to schizophrenia.

Authors:  Hui Liu; Goncalo R Abecasis; Simon C Heath; Alyson Knowles; Sandra Demars; Ying-Jiun Chen; J Louw Roos; Judith L Rapoport; Joseph A Gogos; Maria Karayiorgou
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-11       Impact factor: 11.205

4.  Continuing the search for dyslexia genes on 6p.

Authors:  Elena L Grigorenko; Frank B Wood; Lina Golovyan; Marianne Meyer; Christina Romano; David Pauls
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2003-04-01       Impact factor: 3.568

5.  Functional annotation of mammalian genomic DNA sequence by chemical mutagenesis: a fine-structure genetic mutation map of a 1- to 2-cM segment of mouse chromosome 7 corresponding to human chromosome 11p14-p15.

Authors:  Eugene M Rinchik; Donald A Carpenter; Dabney K Johnson
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-15       Impact factor: 11.205

Review 6.  Human studies of prepulse inhibition of startle: normal subjects, patient groups, and pharmacological studies.

Authors:  D L Braff; M A Geyer; N R Swerdlow
Journal:  Psychopharmacology (Berl)       Date:  2001-07       Impact factor: 4.530

7.  Roles for the winged helix transcription factors MF1 and MFH1 in cardiovascular development revealed by nonallelic noncomplementation of null alleles.

Authors:  G E Winnier; T Kume; K Deng; R Rogers; J Bundy; C Raines; M A Walter; B L Hogan; S J Conway
Journal:  Dev Biol       Date:  1999-09-15       Impact factor: 3.582

8.  Quantitative trait locus for reading disability on chromosome 6p is pleiotropic for attention-deficit/hyperactivity disorder.

Authors:  Erik G Willcutt; Bruce F Pennington; Shelley D Smith; Lon R Cardon; Javier Gayán; Valerie S Knopik; Richard K Olson; John C DeFries
Journal:  Am J Med Genet       Date:  2002-04-08

9.  A gene-driven approach to the identification of ENU mutants in the mouse.

Authors:  Emma L Coghill; Alison Hugill; Nick Parkinson; Claire Davison; Peter Glenister; Sian Clements; Jackie Hunter; Roger D Cox; Steve D M Brown
Journal:  Nat Genet       Date:  2002-02-19       Impact factor: 38.330

10.  Genetic variation in the 6p22.3 gene DTNBP1, the human ortholog of the mouse dysbindin gene, is associated with schizophrenia.

Authors:  Richard E Straub; Yuxin Jiang; Charles J MacLean; Yunlong Ma; Bradley T Webb; Maxim V Myakishev; Carole Harris-Kerr; Brandon Wormley; Hannah Sadek; Bharat Kadambi; Anthony J Cesare; Avi Gibberman; Xu Wang; F Anthony O'Neill; Dermot Walsh; Kenneth S Kendler
Journal:  Am J Hum Genet       Date:  2002-07-03       Impact factor: 11.025

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  14 in total

1.  Probabilistic analysis of recessive mutagenesis screen strategies.

Authors:  Jeremy D Silver; Douglas J Hilton; Melanie Bahlo; Benjamin T Kile
Journal:  Mamm Genome       Date:  2007-01-23       Impact factor: 2.957

2.  Schizophrenia in an adult with 6p25 deletion syndrome.

Authors:  O Caluseriu; G Mirza; J Ragoussis; E W C Chow; D MacCrimmon; A S Bassett
Journal:  Am J Med Genet A       Date:  2006-06-01       Impact factor: 2.802

3.  Episcopic 3D Imaging Methods: Tools for Researching Gene Function.

Authors:  Wolfgang J Weninger; Stefan H Geyer
Journal:  Curr Genomics       Date:  2008-06       Impact factor: 2.236

4.  VACTERL/caudal regression/Currarino syndrome-like malformations in mice with mutation in the proprotein convertase Pcsk5.

Authors:  Dorota Szumska; Guido Pieles; Rachid Essalmani; Michal Bilski; Daniel Mesnard; Kulvinder Kaur; Angela Franklyn; Kamel El Omari; Joanna Jefferis; Jamie Bentham; Jennifer M Taylor; Jurgen E Schneider; Sebastian J Arnold; Paul Johnson; Zuzanna Tymowska-Lalanne; Dave Stammers; Kieran Clarke; Stefan Neubauer; Andrew Morris; Steve D Brown; Charles Shaw-Smith; Armando Cama; Valeria Capra; Jiannis Ragoussis; Daniel Constam; Nabil G Seidah; Annik Prat; Shoumo Bhattacharya
Journal:  Genes Dev       Date:  2008-06-01       Impact factor: 11.361

5.  microMRI-HREM pipeline for high-throughput, high-resolution phenotyping of murine embryos.

Authors:  Guido Pieles; Stefan H Geyer; Dorota Szumska; Jürgen Schneider; Stefan Neubauer; Kieran Clarke; Karl Dorfmeister; Angela Franklyn; Steve D Brown; Shoumo Bhattacharya; Wolfgang J Weninger
Journal:  J Anat       Date:  2007-05-28       Impact factor: 2.610

Review 6.  Mouse models and type 2 diabetes: translational opportunities.

Authors:  Fiona McMurray; Roger D Cox
Journal:  Mamm Genome       Date:  2011-06-29       Impact factor: 2.957

7.  High-throughput analysis of mouse embryos by magnetic resonance imaging.

Authors:  Simon D Bamforth; Jürgen E Schneider; Shoumo Bhattacharya
Journal:  Cold Spring Harb Protoc       Date:  2012-01-01

8.  Upregulation of PKD1L2 provokes a complex neuromuscular disease in the mouse.

Authors:  Francesca E Mackenzie; Rosario Romero; Debbie Williams; Thomas Gillingwater; Helen Hilton; Jim Dick; Joanna Riddoch-Contreras; Frances Wong; Lisa Ireson; Nicola Powles-Glover; Genna Riley; Peter Underhill; Tertius Hough; Ruth Arkell; Linda Greensmith; Richard R Ribchester; Gonzalo Blanco
Journal:  Hum Mol Genet       Date:  2009-07-04       Impact factor: 6.150

9.  Mutation of the diamond-blackfan anemia gene Rps7 in mouse results in morphological and neuroanatomical phenotypes.

Authors:  Dawn E Watkins-Chow; Joanna Cooke; Ruth Pidsley; Andrew Edwards; Rebecca Slotkin; Karen E Leeds; Raymond Mullen; Laura L Baxter; Thomas G Campbell; Marion C Salzer; Laura Biondini; Gretchen Gibney; Françoise Phan Dinh Tuy; Jamel Chelly; H Douglas Morris; Johannes Riegler; Mark F Lythgoe; Ruth M Arkell; Fabrizio Loreni; Jonathan Flint; William J Pavan; David A Keays
Journal:  PLoS Genet       Date:  2013-01-31       Impact factor: 5.917

10.  Genome-wide ENU mutagenesis in combination with high density SNP analysis and exome sequencing provides rapid identification of novel mouse models of developmental disease.

Authors:  Georgina Caruana; Peter G Farlie; Adam H Hart; Stefan Bagheri-Fam; Megan J Wallace; Michael S Dobbie; Christopher T Gordon; Kerry A Miller; Belinda Whittle; Helen E Abud; Ruth M Arkell; Timothy J Cole; Vincent R Harley; Ian M Smyth; John F Bertram
Journal:  PLoS One       Date:  2013-03-01       Impact factor: 3.240

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