Literature DB >> 1610799

Multiple role of hydrophobicity of tryptophan-108 in chicken lysozyme: structural stability, saccharide binding ability, and abnormal pKa of glutamic acid-35.

M Inoue1, H Yamada, T Yasukochi, R Kuroki, T Miki, T Horiuchi, T Imoto.   

Abstract

Trp108 of chicken lysozyme is in van der Waals contact with Glu35, one of two catalytic carboxyl groups. The role of Trp108 in lysozyme function and stability was investigated by using mutant lysozymes secreted from yeast. By the replacement of Trp108 with less hydrophobic residues, Tyr (W108Y lysozyme) and Gln (W108Q lysozyme), the activity, saccharide binding ability, stability, and pKa of Glu35 were all decreased with a decrease in the hydrophobicity of residue 108. Namely, at pH 5.5 and 40 degrees C, the activities of W108Y and W108Q lysozymes against glycol chitin were 17.3 and 1.6% of that of wild-type lysozyme, and their dissociation constants for the binding of a trimer of N-acetyl-D-glucosamine were 7.4 and 309 times larger than that of wild-type lysozyme, respectively. For the reversible unfolding at pH 3.5 and 30 degrees C, W108Y and W108Q lysozymes were less stable than wild-type lysozyme by 1.4 and 3.6 kcal/mol, respectively. As for the pKa of Glu35, the values for W108Y and W108Q lysozymes were found to be lower than that for wild-type lysozyme by 0.2 and by 0.6 pKa unit, respectively. The pKa of Glu35 in lysozyme was also decreased from 6.1 to 5.4 by the presence of 1-3 M guanidine hydrochloride, or to 5.5 by the substitution of Asn for Asp52, another catalytic carboxyl group. Thus, both the hydrophobicity of Trp108 and the electrostatic interaction with Asp52 are equally responsible for the abnormally high pKa (6.1) of Glu35, compared with that (4.4) of a normal glutamic acid residue.(ABSTRACT TRUNCATED AT 250 WORDS)

Entities:  

Mesh:

Substances:

Year:  1992        PMID: 1610799     DOI: 10.1021/bi00139a017

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  12 in total

1.  Stabilization of hen egg white lysozyme by a cavity-filling mutation.

Authors:  T Ohmura; T Ueda; K Ootsuka; M Saito; T Imoto
Journal:  Protein Sci       Date:  2001-02       Impact factor: 6.725

2.  DC-SIGN neck domain is a pH-sensor controlling oligomerization: SAXS and hydrodynamic studies of extracellular domain.

Authors:  Georges Tabarani; Michel Thépaut; David Stroebel; Christine Ebel; Corinne Vivès; Patrice Vachette; Dominique Durand; Franck Fieschi
Journal:  J Biol Chem       Date:  2009-06-05       Impact factor: 5.157

3.  Carbohydrate recognition by RpfB from Mycobacterium tuberculosis unveiled by crystallographic and molecular dynamics analyses.

Authors:  Flavia Squeglia; Maria Romano; Alessia Ruggiero; Luigi Vitagliano; Alfonso De Simone; Rita Berisio
Journal:  Biophys J       Date:  2013-06-04       Impact factor: 4.033

4.  Contribution of conformational stability of hen lysozyme to induction of type 2 T-helper immune responses.

Authors:  T So; H Ito; M Hirata; T Ueda; T Imoto
Journal:  Immunology       Date:  2001-11       Impact factor: 7.397

5.  Uncovering the determinants of a highly perturbed tyrosine pKa in the active site of ketosteroid isomerase.

Authors:  Jason P Schwans; Fanny Sunden; Ana Gonzalez; Yingssu Tsai; Daniel Herschlag
Journal:  Biochemistry       Date:  2013-10-23       Impact factor: 3.162

6.  Modeling effects of human single nucleotide polymorphisms on protein-protein interactions.

Authors:  Shaolei Teng; Thomas Madej; Anna Panchenko; Emil Alexov
Journal:  Biophys J       Date:  2009-03-18       Impact factor: 4.033

7.  The interaction of lysozyme with caffeine, theophylline and theobromine in solution.

Authors:  Hong-Mei Zhang; Bo-Ping Tang; Yan-Qing Wang
Journal:  Mol Biol Rep       Date:  2009-10-13       Impact factor: 2.316

8.  The effects of tyrosine nitration on the structure and function of hen egg-white lysozyme.

Authors:  P G Richards; D J Walton; J Heptinstall
Journal:  Biochem J       Date:  1996-04-15       Impact factor: 3.857

9.  High-pressure protein crystallography of hen egg-white lysozyme.

Authors:  Hiroyuki Yamada; Takayuki Nagae; Nobuhisa Watanabe
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2015-03-26

10.  Structural, Functional and Phylogenetic Analysis of Sperm Lysozyme-Like Proteins.

Authors:  Shalini Kalra; Mangottil Ayyappan Pradeep; Ashok K Mohanty; Jai K Kaushik
Journal:  PLoS One       Date:  2016-11-10       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.