Literature DB >> 16107698

A mutation in Dbf4 motif M impairs interactions with DNA replication factors and confers increased resistance to genotoxic agents.

Angela E Varrin1, Ajai A Prasad, Rolf-Peter Scholz, Matthew D Ramer, Bernard P Duncker.   

Abstract

Dbf4/Cdc7 is required for DNA replication in Saccharomyces cerevisiae and appears to be a target in the S-phase checkpoint. Previously, a 186-amino-acid Dbf4 region that mediates interactions with both the origin recognition complex and Rad53 was identified. We now show this domain also mediates the association between Dbf4 and Mcm2, a key Dbf4/Cdc7 phosphorylation target. Two conserved sequences, the N and M motifs, have been identified within this Dbf4 region. Removing motif M (Dbf4DeltaM) impairs the ability of Dbf4 to support normal cell cycle progression and abrogates the Dbf4-Mcm2 association but has no effect on the Dbf4-Rad53 interaction. In contrast, deleting motif N (Dbf4DeltaN) does not affect the essential function of Dbf4, disrupts the Dbf4-Rad53 interaction, largely preserves the Dbf4-Mcm2 association, and renders the cells hypersensitive to genotoxic agents. Surprisingly, Dbf4DeltaM interacts strongly with Orc2, while Dbf4DeltaN does not. The DBF4 allele dna52-1 was cloned and sequenced, revealing a single point mutation within the M motif. This mutant is unable to maintain interactions with either Mcm2 or Orc2 at the semipermissive temperature of 30 degrees C, while the interaction with Rad53 is preserved. Furthermore, this mutation confers increased resistance to genotoxic agents, which we propose is more likely due to a role for Dbf4 in the resumption of fork progression following checkpoint-induced arrest than prevention of late origin firing. Thus, the alteration of the M motif may facilitate the role of Dbf4 as a checkpoint target.

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Year:  2005        PMID: 16107698      PMCID: PMC1190303          DOI: 10.1128/MCB.25.17.7494-7504.2005

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  50 in total

1.  Cell cycle regulation of DNA replication initiator factor Dbf4p.

Authors:  L Cheng; T Collyer; C F Hardy
Journal:  Mol Cell Biol       Date:  1999-06       Impact factor: 4.272

2.  A set of vectors with a tetracycline-regulatable promoter system for modulated gene expression in Saccharomyces cerevisiae.

Authors:  E Garí; L Piedrafita; M Aldea; E Herrero
Journal:  Yeast       Date:  1997-07       Impact factor: 3.239

3.  Cdc7 is required throughout the yeast S phase to activate replication origins.

Authors:  A D Donaldson; W L Fangman; B J Brewer
Journal:  Genes Dev       Date:  1998-02-15       Impact factor: 11.361

4.  The Cdc7 protein kinase is required for origin firing during S phase.

Authors:  K Bousset; J F Diffley
Journal:  Genes Dev       Date:  1998-02-15       Impact factor: 11.361

5.  Mcm2 is a target of regulation by Cdc7-Dbf4 during the initiation of DNA synthesis.

Authors:  M Lei; Y Kawasaki; M R Young; M Kihara; A Sugino; B K Tye
Journal:  Genes Dev       Date:  1997-12-15       Impact factor: 11.361

6.  RAD53 regulates DBF4 independently of checkpoint function in Saccharomyces cerevisiae.

Authors:  P R Dohrmann; G Oshiro; M Tecklenburg; R A Sclafani
Journal:  Genetics       Date:  1999-03       Impact factor: 4.562

7.  A novel role for Cdc5p in DNA replication.

Authors:  C F Hardy; A Pautz
Journal:  Mol Cell Biol       Date:  1996-12       Impact factor: 4.272

8.  Oligomers of the Cdc7/Dbf4 protein kinase exist in the yeast cell.

Authors:  Y G Shellman; I E Schauer; G Oshiro; P Dohrmann; R A Sclafani
Journal:  Mol Gen Genet       Date:  1998-09

9.  Regulation of DNA-replication origins during cell-cycle progression.

Authors:  K Shirahige; Y Hori; K Shiraishi; M Yamashita; K Takahashi; C Obuse; T Tsurimoto; H Yoshikawa
Journal:  Nature       Date:  1998-10-08       Impact factor: 49.962

10.  A Mec1- and Rad53-dependent checkpoint controls late-firing origins of DNA replication.

Authors:  C Santocanale; J F Diffley
Journal:  Nature       Date:  1998-10-08       Impact factor: 49.962

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  21 in total

1.  Saccharomyces cerevisiae Dbf4 has unique fold necessary for interaction with Rad53 kinase.

Authors:  Lindsay A Matthews; Darryl R Jones; Ajai A Prasad; Bernard P Duncker; Alba Guarné
Journal:  J Biol Chem       Date:  2011-11-29       Impact factor: 5.157

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Authors:  Laura I Francis; John C W Randell; Thomas J Takara; Lilen Uchima; Stephen P Bell
Journal:  Genes Dev       Date:  2009-03-01       Impact factor: 11.361

3.  A novel non-canonical forkhead-associated (FHA) domain-binding interface mediates the interaction between Rad53 and Dbf4 proteins.

Authors:  Lindsay A Matthews; Rajeevan Selvaratnam; Darryl R Jones; Madoka Akimoto; Brendan J McConkey; Giuseppe Melacini; Bernard P Duncker; Alba Guarné
Journal:  J Biol Chem       Date:  2013-11-27       Impact factor: 5.157

4.  Crystallization and preliminary X-ray diffraction analysis of motif N from Saccharomyces cerevisiae Dbf4.

Authors:  Lindsay A Matthews; Andrew Duong; Ajai A Prasad; Bernard P Duncker; Alba Guarné
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-08-22

5.  Dbf4 and Cdc7 proteins promote DNA replication through interactions with distinct Mcm2-7 protein subunits.

Authors:  Matthew D Ramer; Evelyin S Suman; Hagen Richter; Karen Stanger; Martina Spranger; Nicole Bieberstein; Bernard P Duncker
Journal:  J Biol Chem       Date:  2013-04-02       Impact factor: 5.157

Review 6.  Dbf4: the whole is greater than the sum of its parts.

Authors:  Lindsay A Matthews; Alba Guarné
Journal:  Cell Cycle       Date:  2013-04-02       Impact factor: 4.534

7.  Mcm10 deficiency causes defective-replisome-induced mutagenesis and a dependency on error-free postreplicative repair.

Authors:  Jordan R Becker; Hai Dang Nguyen; Xiaohan Wang; Anja-Katrin Bielinsky
Journal:  Cell Cycle       Date:  2014-03-27       Impact factor: 4.534

8.  Integrin alpha5beta1 function is regulated by XGIPC/kermit2 mediated endocytosis during Xenopus laevis gastrulation.

Authors:  Erin Spicer; Catherine Suckert; Hyder Al-Attar; Mungo Marsden
Journal:  PLoS One       Date:  2010-05-17       Impact factor: 3.240

9.  A Dbf4p BRCA1 C-terminal-like domain required for the response to replication fork arrest in budding yeast.

Authors:  Carrie Gabrielse; Charles T Miller; Kristopher H McConnell; Aaron DeWard; Catherine A Fox; Michael Weinreich
Journal:  Genetics       Date:  2006-03-17       Impact factor: 4.562

10.  Drug design with Cdc7 kinase: a potential novel cancer therapy target.

Authors:  Masaaki Sawa; Hisao Masai
Journal:  Drug Des Devel Ther       Date:  2009-02-06       Impact factor: 4.162

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