Literature DB >> 19724125

Crystallization and preliminary X-ray diffraction analysis of motif N from Saccharomyces cerevisiae Dbf4.

Lindsay A Matthews1, Andrew Duong, Ajai A Prasad, Bernard P Duncker, Alba Guarné.   

Abstract

The Cdc7-Dbf4 complex plays an instrumental role in the initiation of DNA replication and is a target of replication-checkpoint responses in Saccharomyces cerevisiae. Cdc7 is a conserved serine/threonine kinase whose activity depends on association with its regulatory subunit, Dbf4. A conserved sequence near the N-terminus of Dbf4 (motif N) is necessary for the interaction of Cdc7-Dbf4 with the checkpoint kinase Rad53. To understand the role of the Cdc7-Dbf4 complex in checkpoint responses, a fragment of Saccharomyces cerevisiae Dbf4 encompassing motif N was isolated, overproduced and crystallized. A complete native data set was collected at 100 K from crystals that diffracted X-rays to 2.75 A resolution and structure determination is currently under way.

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Year:  2009        PMID: 19724125      PMCID: PMC2795593          DOI: 10.1107/S1744309109029376

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  28 in total

1.  Dbf4 motifs: conserved motifs in activation subunits for Cdc7 kinases essential for S-phase.

Authors:  H Masai; K Arai
Journal:  Biochem Biophys Res Commun       Date:  2000-08-18       Impact factor: 3.575

Review 2.  DNA replication in eukaryotic cells.

Authors:  Stephen P Bell; Anindya Dutta
Journal:  Annu Rev Biochem       Date:  2001-11-09       Impact factor: 23.643

3.  The CCP4 suite: programs for protein crystallography.

Authors: 
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-09-01

4.  Pentaerythritol propoxylate: a new crystallization agent and cryoprotectant induces crystal growth of 2-methylcitrate dehydratase.

Authors:  Andrew M Gulick; Alexander R Horswill; James B Thoden; Jorge C Escalante-Semerena; Ivan Rayment
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-01-24

5.  Cdc7p-Dbf4p kinase binds to chromatin during S phase and is regulated by both the APC and the RAD53 checkpoint pathway.

Authors:  M Weinreich; B Stillman
Journal:  EMBO J       Date:  1999-10-01       Impact factor: 11.598

6.  Bipartite binding of a kinase activator activates Cdc7-related kinase essential for S phase.

Authors:  K Ogino; T Takeda; E Matsui; H Iiyama; C Taniyama; K Arai ; H Masai
Journal:  J Biol Chem       Date:  2001-06-11       Impact factor: 5.157

7.  Characterization of the yeast Cdc7p/Dbf4p complex purified from insect cells. Its protein kinase activity is regulated by Rad53p.

Authors:  M Kihara; W Nakai; S Asano; A Suzuki; K Kitada; Y Kawasaki; L H Johnston; A Sugino
Journal:  J Biol Chem       Date:  2000-11-10       Impact factor: 5.157

Review 8.  Cdc7 kinase complex: a key regulator in the initiation of DNA replication.

Authors:  Hisao Masai; Ken-Ichi Arai
Journal:  J Cell Physiol       Date:  2002-03       Impact factor: 6.384

9.  A role for the Cdc7 kinase regulatory subunit Dbf4p in the formation of initiation-competent origins of replication.

Authors:  P Pasero; B P Duncker; E Schwob; S M Gasser
Journal:  Genes Dev       Date:  1999-08-15       Impact factor: 11.361

10.  Cdc7p-Dbf4p becomes famous in the cell cycle.

Authors:  R A Sclafani
Journal:  J Cell Sci       Date:  2000-06       Impact factor: 5.285

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  3 in total

1.  Saccharomyces cerevisiae Dbf4 has unique fold necessary for interaction with Rad53 kinase.

Authors:  Lindsay A Matthews; Darryl R Jones; Ajai A Prasad; Bernard P Duncker; Alba Guarné
Journal:  J Biol Chem       Date:  2011-11-29       Impact factor: 5.157

Review 2.  Dbf4: the whole is greater than the sum of its parts.

Authors:  Lindsay A Matthews; Alba Guarné
Journal:  Cell Cycle       Date:  2013-04-02       Impact factor: 4.534

3.  The Sir4 H-BRCT domain interacts with phospho-proteins to sequester and repress yeast heterochromatin.

Authors:  Ishan Deshpande; Jeremy J Keusch; Kiran Challa; Vytautas Iesmantavicius; Susan M Gasser; Heinz Gut
Journal:  EMBO J       Date:  2019-09-12       Impact factor: 11.598

  3 in total

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