Literature DB >> 16103214

Transcription switches for protoxylem and metaxylem vessel formation.

Minoru Kubo1, Makiko Udagawa, Nobuyuki Nishikubo, Gorou Horiguchi, Masatoshi Yamaguchi, Jun Ito, Tetsuro Mimura, Hiroo Fukuda, Taku Demura.   

Abstract

Land plants evolved xylem vessels to conduct water and nutrients, and to support the plant. Microarray analysis with a newly established Arabidopsis in vitro xylem vessel element formation system and promoter analysis revealed the possible involvement of some plant-specific NAC-domain transcription factors in xylem formation. VASCULAR-RELATED NAC-DOMAIN6 (VND6) and VND7 can induce transdifferentiation of various cells into metaxylem- and protoxylem-like vessel elements, respectively, in Arabidopsis and poplar. A dominant repression of VND6 and VND7 specifically inhibits metaxylem and protoxylem vessel formation in roots, respectively. These findings suggest that these genes are transcription switches for plant metaxylem and protoxylem vessel formation.

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Year:  2005        PMID: 16103214      PMCID: PMC1186185          DOI: 10.1101/gad.1331305

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  29 in total

1.  Visualization by comprehensive microarray analysis of gene expression programs during transdifferentiation of mesophyll cells into xylem cells.

Authors:  Taku Demura; Gen Tashiro; Gorou Horiguchi; Naoki Kishimoto; Minoru Kubo; Naoko Matsuoka; Atsushi Minami; Miyo Nagata-Hiwatashi; Keiko Nakamura; Yoshimichi Okamura; Naomi Sassa; Shinsuke Suzuki; Junshi Yazaki; Shoshi Kikuchi; Hiroo Fukuda
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-18       Impact factor: 11.205

2.  Radial patterning of Arabidopsis shoots by class III HD-ZIP and KANADI genes.

Authors:  John F Emery; Sandra K Floyd; John Alvarez; Yuval Eshed; Nathaniel P Hawker; Anat Izhaki; Stuart F Baum; John L Bowman
Journal:  Curr Biol       Date:  2003-10-14       Impact factor: 10.834

3.  Dominant repression of target genes by chimeric repressors that include the EAR motif, a repression domain, in Arabidopsis.

Authors:  Keiichiro Hiratsu; Kyoko Matsui; Tomotsugu Koyama; Masaru Ohme-Takagi
Journal:  Plant J       Date:  2003-06       Impact factor: 6.417

Review 4.  Myogenic regulatory factors and the specification of muscle progenitors in vertebrate embryos.

Authors:  Mary Elizabeth Pownall; Marcus K Gustafsson; Charles P Emerson
Journal:  Annu Rev Cell Dev Biol       Date:  2002-04-02       Impact factor: 13.827

Review 5.  Vascular tissue differentiation and pattern formation in plants.

Authors:  Zheng-Hua Ye
Journal:  Annu Rev Plant Biol       Date:  2002       Impact factor: 26.379

Review 6.  Cell-fate specification in the epidermis: a common patterning mechanism in the root and shoot.

Authors:  John Schiefelbein
Journal:  Curr Opin Plant Biol       Date:  2003-02       Impact factor: 7.834

7.  Arabidopsis NAC1 transduces auxin signal downstream of TIR1 to promote lateral root development.

Authors:  Q Xie; G Frugis; D Colgan; N H Chua
Journal:  Genes Dev       Date:  2000-12-01       Impact factor: 11.361

8.  The CUP-SHAPED COTYLEDON3 gene is required for boundary and shoot meristem formation in Arabidopsis.

Authors:  Casper W Vroemen; Andreas P Mordhorst; Cathy Albrecht; Mark A C J Kwaaitaal; Sacco C de Vries
Journal:  Plant Cell       Date:  2003-07       Impact factor: 11.277

9.  Molecular characterization of AtNAM: a member of the Arabidopsis NAC domain superfamily.

Authors:  Manuel Duval; Tzung-Fu Hsieh; Soo Young Kim; Terry L Thomas
Journal:  Plant Mol Biol       Date:  2002-09       Impact factor: 4.076

10.  Isolation and functional analysis of Arabidopsis stress-inducible NAC transcription factors that bind to a drought-responsive cis-element in the early responsive to dehydration stress 1 promoter.

Authors:  Lam-Son Phan Tran; Kazuo Nakashima; Yoh Sakuma; Sean D Simpson; Yasunari Fujita; Kyonoshin Maruyama; Miki Fujita; Motoaki Seki; Kazuo Shinozaki; Kazuko Yamaguchi-Shinozaki
Journal:  Plant Cell       Date:  2004-08-19       Impact factor: 11.277

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  360 in total

1.  GIGAS CELL1, a novel negative regulator of the anaphase-promoting complex/cyclosome, is required for proper mitotic progression and cell fate determination in Arabidopsis.

Authors:  Eriko Iwata; Saki Ikeda; Sachihiro Matsunaga; Mariko Kurata; Yasushi Yoshioka; Marie-Claire Criqui; Pascal Genschik; Masaki Ito
Journal:  Plant Cell       Date:  2011-12-13       Impact factor: 11.277

Review 2.  Control of Arabidopsis root development.

Authors:  Jalean J Petricka; Cara M Winter; Philip N Benfey
Journal:  Annu Rev Plant Biol       Date:  2012-02-09       Impact factor: 26.379

3.  Characterization of NAC domain transcription factors implicated in control of vascular cell differentiation in Arabidopsis and Populus.

Authors:  Emily H Grant; Takeshi Fujino; Eric P Beers; Amy M Brunner
Journal:  Planta       Date:  2010-05-11       Impact factor: 4.116

4.  Lignin biosynthesis and structure.

Authors:  Ruben Vanholme; Brecht Demedts; Kris Morreel; John Ralph; Wout Boerjan
Journal:  Plant Physiol       Date:  2010-05-14       Impact factor: 8.340

5.  The poplar PtrWNDs are transcriptional activators of secondary cell wall biosynthesis.

Authors:  Ruiqin Zhong; Zheng-Hua Ye
Journal:  Plant Signal Behav       Date:  2010-04-02

6.  SND1 transcription factor-directed quantitative functional hierarchical genetic regulatory network in wood formation in Populus trichocarpa.

Authors:  Ying-Chung Lin; Wei Li; Ying-Hsuan Sun; Sapna Kumari; Hairong Wei; Quanzi Li; Sermsawat Tunlaya-Anukit; Ronald R Sederoff; Vincent L Chiang
Journal:  Plant Cell       Date:  2013-11-26       Impact factor: 11.277

7.  Small-interfering RNAs from natural antisense transcripts derived from a cellulose synthase gene modulate cell wall biosynthesis in barley.

Authors:  Michael A Held; Bryan Penning; Amanda S Brandt; Sarah A Kessans; Weidong Yong; Steven R Scofield; Nicholas C Carpita
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-15       Impact factor: 11.205

8.  Evidence that thiol-based redox state is critical for xylem vessel cell differentiation.

Authors:  Misato Ohtani; Harunori Kawabe; Taku Demura
Journal:  Plant Signal Behav       Date:  2018-04-16

9.  Diarch symmetry of the vascular bundle in Arabidopsis root encompasses the pericycle and is reflected in distich lateral root initiation.

Authors:  Boris Parizot; Laurent Laplaze; Lilian Ricaud; Elodie Boucheron-Dubuisson; Vincent Bayle; Martin Bonke; Ive De Smet; Scott R Poethig; Yka Helariutta; Jim Haseloff; Dominique Chriqui; Tom Beeckman; Laurent Nussaume
Journal:  Plant Physiol       Date:  2007-11-09       Impact factor: 8.340

10.  Intertissue signal transfer of abscisic acid from vascular cells to guard cells.

Authors:  Takashi Kuromori; Eriko Sugimoto; Kazuo Shinozaki
Journal:  Plant Physiol       Date:  2014-02-12       Impact factor: 8.340

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