Literature DB >> 16094444

Chromatin remodeling complexes: ATP-dependent machines in action.

Cotteka N Johnson1, Nicholas L Adkins, Philippe Georgel.   

Abstract

Since the initial characterization of chromatin remodeling as an ATP-dependent process, many studies have given us insight into how nucleosome-remodeling complexes can affect various nuclear functions. However, the multistep DNA-histone remodeling process has not been completely elucidated. Although new studies are published on a nearly weekly basis, the nature and roles of interactions of the individual SWI/SNF- and ISWI-based remodeling complexes and DNA, core histones, and other chromatin-associated proteins are not fully understood. In addition, the potential changes associated with ATP recruitment and its subsequent hydrolysis have not been fully characterized. This review explores possible mechanisms by which chromatin-remodeling complexes are recruited to specific loci, use ATP hydrolysis to achieve actual remodeling through disruption of DNA-histone interactions, and are released from their chromatin template. We propose possible roles for ATP hydrolysis in a chromatin-release/target-scanning process that offer an alternative to or complement the often overlooked function of delivering the energy required for sliding or dislodging specific subsets of core histones.

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Year:  2005        PMID: 16094444     DOI: 10.1139/o05-115

Source DB:  PubMed          Journal:  Biochem Cell Biol        ISSN: 0829-8211            Impact factor:   3.626


  27 in total

Review 1.  ATP-dependent chromatin remodeling factors and DNA damage repair.

Authors:  Mary Ann Osley; Toyoko Tsukuda; Jac A Nickoloff
Journal:  Mutat Res       Date:  2007-01-21       Impact factor: 2.433

2.  An emerin "proteome": purification of distinct emerin-containing complexes from HeLa cells suggests molecular basis for diverse roles including gene regulation, mRNA splicing, signaling, mechanosensing, and nuclear architecture.

Authors:  James M Holaska; Katherine L Wilson
Journal:  Biochemistry       Date:  2007-07-10       Impact factor: 3.162

3.  Atomic force microscopy imaging of SWI/SNF action: mapping the nucleosome remodeling and sliding.

Authors:  Fabien Montel; Emeline Fontaine; Philippe St-Jean; Martin Castelnovo; Cendrine Faivre-Moskalenko
Journal:  Biophys J       Date:  2007-04-27       Impact factor: 4.033

4.  The N-CoR complex enables chromatin remodeler SNF2H to enhance repression by thyroid hormone receptor.

Authors:  Theresa Alenghat; Jiujiu Yu; Mitchell A Lazar
Journal:  EMBO J       Date:  2006-08-17       Impact factor: 11.598

5.  Selective recognition of acetylated histones by bromodomains in transcriptional co-activators.

Authors:  Ahmed H Hassan; Salma Awad; Zeina Al-Natour; Samah Othman; Farah Mustafa; Tahir A Rizvi
Journal:  Biochem J       Date:  2007-02-15       Impact factor: 3.857

Review 6.  Chromatin-remodeling complex specificity and embryonic vascular development.

Authors:  Carol D Curtis; Reema B Davis; Kyle G Ingram; Courtney T Griffin
Journal:  Cell Mol Life Sci       Date:  2012-05-23       Impact factor: 9.261

7.  Epigenetic mechanisms modulate thyroid transcription factor 1-mediated transcription of the surfactant protein B gene.

Authors:  Yuxia Cao; Tiffany Vo; Guetchyn Millien; Jean-Bosco Tagne; Darrell Kotton; Robert J Mason; Mary C Williams; Maria I Ramirez
Journal:  J Biol Chem       Date:  2009-11-10       Impact factor: 5.157

Review 8.  Analysis of epigenetic alterations to chromatin during development.

Authors:  Meghan E Minard; Abhinav K Jain; Michelle Craig Barton
Journal:  Genesis       Date:  2009-08       Impact factor: 2.487

9.  PvALF and FUS3 activate expression from the phaseolin promoter by different mechanisms.

Authors:  Danny W-K Ng; Timothy C Hall
Journal:  Plant Mol Biol       Date:  2007-11-23       Impact factor: 4.076

10.  Spatiotemporal regulation of ATP and Ca2+ dynamics in vertebrate rod and cone ribbon synapses.

Authors:  Jerry E Johnson; Guy A Perkins; Anand Giddabasappa; Shawntay Chaney; Weimin Xiao; Andrew D White; Joshua M Brown; Jenna Waggoner; Mark H Ellisman; Donald A Fox
Journal:  Mol Vis       Date:  2007-06-15       Impact factor: 2.367

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