Literature DB >> 16091936

Structural and functional reconstruction in situ of the [CuSMoO2] active site of carbon monoxide dehydrogenase from the carbon monoxide oxidizing eubacterium Oligotropha carboxidovorans.

Marcus Resch1, Holger Dobbek, Ortwin Meyer.   

Abstract

Carbon monoxide dehydrogenase from the bacterium Oligotropha carboxidovorans catalyzes the oxidation of CO to CO(2) at a unique [CuSMoO(2)] cluster. In the bacteria the cluster is assembled post-translational. The integration of S, and particularly of Cu, is rate limiting in vivo, which leads to CO dehydrogenase preparations containing the mature and fully functional enzyme along with forms of the enzyme deficient in one or both of these elements. The active sites of mature and immature forms of CO dehydrogenase were converted into a [MoO(3)] centre by treatment with potassium cyanide. We have established a method, which rescues 50% of the CO dehydrogenase activity by in vitro reconstitution of the active site through the supply of sulphide first and subsequently of Cu(I) under reducing conditions. Immature forms of CO dehydrogenase isolated from the bacterium, which were deficient in S and/or Cu at the active site, were similarly activated. X-ray crystallography and electron paramagnetic resonance spectroscopy indicated that the [CuSMoO(2)] cluster was properly reconstructed. However, reconstituted CO dehydrogenase contains mature along with immature forms. The chemical reactions of the reconstitution of CO dehydrogenase are summarized in a model, which assumes resulphuration of the Mo-ion at both equatorial positions at a 1:1 molar ratio. One equatorial Mo-S group reacts with Cu(I) in a productive fashion yielding a mature, functional [CuSMoO(2)] cluster. The other Mo-S group reacts with Cu(I), then Cu(2)S is released and an oxo group is introduced from water, yielding an inactive [MoO(3)] centre.

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Year:  2005        PMID: 16091936     DOI: 10.1007/s00775-005-0006-4

Source DB:  PubMed          Journal:  J Biol Inorg Chem        ISSN: 0949-8257            Impact factor:   3.358


  19 in total

1.  Homology and distribution of CO dehydrogenase structural genes in carboxydotrophic bacteria.

Authors:  M Kraut; I Hugendieck; S Herwig; O Meyer
Journal:  Arch Microbiol       Date:  1989       Impact factor: 2.552

2.  Crystallography & NMR system: A new software suite for macromolecular structure determination.

Authors:  A T Brünger; P D Adams; G M Clore; W L DeLano; P Gros; R W Grosse-Kunstleve; J S Jiang; J Kuszewski; M Nilges; N S Pannu; R J Read; L M Rice; T Simonson; G L Warren
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-09-01

3.  Catalysis at a dinuclear [CuSMo(==O)OH] cluster in a CO dehydrogenase resolved at 1.1-A resolution.

Authors:  Holger Dobbek; Lothar Gremer; Reiner Kiefersauer; Robert Huber; Ortwin Meyer
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-10       Impact factor: 11.205

4.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

5.  Thiosulfate: cyanide sulfurtransferase (rhodanese).

Authors:  J Westley
Journal:  Methods Enzymol       Date:  1981       Impact factor: 1.600

6.  Crystal structure and mechanism of CO dehydrogenase, a molybdo iron-sulfur flavoprotein containing S-selanylcysteine.

Authors:  H Dobbek; L Gremer; O Meyer; R Huber
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

7.  Resonance Raman studies on xanthine oxidase: observation of Mo(VI)-ligand vibrations.

Authors:  Nakul C Maiti; Takeshi Tomita; Teizo Kitagawa; Ken Okamoto; Takeshi Nishino
Journal:  J Biol Inorg Chem       Date:  2002-11-22       Impact factor: 3.358

Review 8.  The role of Se, Mo and Fe in the structure and function of carbon monoxide dehydrogenase.

Authors:  O Meyer; L Gremer; R Ferner; M Ferner; H Dobbek; M Gnida; W Meyer-Klaucke; R Huber
Journal:  Biol Chem       Date:  2000 Sep-Oct       Impact factor: 3.915

9.  Reisolation of the carbon monoxide utilizing hydrogen bacterium Pseudomonas carboxydovorans (Kistner) comb. nov.

Authors:  O Meyer; H G Schlegel
Journal:  Arch Microbiol       Date:  1978-07       Impact factor: 2.552

10.  Complete nucleotide sequence of the circular megaplasmid pHCG3 of Oligotropha carboxidovorans: function in the chemolithoautotrophic utilization of CO, H(2) and CO(2).

Authors:  Sven Fuhrmann; Marion Ferner; Thomas Jeffke; Anke Henne; Gerhard Gottschalk; Ortwin Meyer
Journal:  Gene       Date:  2003-12-11       Impact factor: 3.688

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  14 in total

1.  Reaction of the molybdenum- and copper-containing carbon monoxide dehydrogenase from Oligotropha carboxydovorans with quinones.

Authors:  Jarett Wilcoxen; Bo Zhang; Russ Hille
Journal:  Biochemistry       Date:  2011-02-16       Impact factor: 3.162

2.  Kinetic and spectroscopic studies of the molybdenum-copper CO dehydrogenase from Oligotropha carboxidovorans.

Authors:  Bo Zhang; Craig F Hemann; Russ Hille
Journal:  J Biol Chem       Date:  2010-02-23       Impact factor: 5.157

Review 3.  The aerobic CO dehydrogenase from Oligotropha carboxidovorans.

Authors:  Russ Hille; Stephanie Dingwall; Jarett Wilcoxen
Journal:  J Biol Inorg Chem       Date:  2014-08-26       Impact factor: 3.358

Review 4.  The mononuclear molybdenum enzymes.

Authors:  Russ Hille; James Hall; Partha Basu
Journal:  Chem Rev       Date:  2014-01-28       Impact factor: 60.622

Review 5.  Metal centers in the anaerobic microbial metabolism of CO and CO2.

Authors:  Güneş Bender; Elizabeth Pierce; Jeffrey A Hill; Joseph E Darty; Stephen W Ragsdale
Journal:  Metallomics       Date:  2011-06-06       Impact factor: 4.526

6.  The CoxD protein of Oligotropha carboxidovorans is a predicted AAA+ ATPase chaperone involved in the biogenesis of the CO dehydrogenase [CuSMoO2] cluster.

Authors:  Astrid Pelzmann; Marion Ferner; Manuel Gnida; Wolfram Meyer-Klaucke; Tobias Maisel; Ortwin Meyer
Journal:  J Biol Chem       Date:  2009-02-02       Impact factor: 5.157

7.  (13)C and (63,65)Cu ENDOR studies of CO dehydrogenase from Oligotropha carboxidovorans. Experimental evidence in support of a copper-carbonyl intermediate.

Authors:  Muralidharan Shanmugam; Jarett Wilcoxen; Diana Habel-Rodriguez; George E Cutsail; Martin L Kirk; Brian M Hoffman; Russ Hille
Journal:  J Am Chem Soc       Date:  2013-11-19       Impact factor: 15.419

8.  The hydrogenase activity of the molybdenum/copper-containing carbon monoxide dehydrogenase of Oligotropha carboxidovorans.

Authors:  Jarett Wilcoxen; Russ Hille
Journal:  J Biol Chem       Date:  2013-10-28       Impact factor: 5.157

9.  CO dehydrogenase genes found in metagenomic fosmid clones from the deep mediterranean sea.

Authors:  Ana-Belen Martin-Cuadrado; Rohit Ghai; Aitor Gonzaga; Francisco Rodriguez-Valera
Journal:  Appl Environ Microbiol       Date:  2009-10-02       Impact factor: 4.792

10.  The CoxD protein, a novel AAA+ ATPase involved in metal cluster assembly: hydrolysis of nucleotide-triphosphates and oligomerization.

Authors:  Tobias Maisel; Stephanie Joseph; Thorsten Mielke; Jörg Bürger; Stephan Schwarzinger; Ortwin Meyer
Journal:  PLoS One       Date:  2012-10-15       Impact factor: 3.240

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