Literature DB >> 16089930

Distinctive features of the biological catch bond in the jump-ramp force regime predicted by the two-pathway model.

Yuriy V Pereverzev1, Oleg V Prezhdo, Wendy E Thomas, Evgeni V Sokurenko.   

Abstract

The receptor-ligand unbinding in the biological catch bond is analyzed within a simple model that comprises a single bound state and two unbinding pathways. This model is investigated in detail for the jump-ramp force regime, where the pulling force quickly jumps to a finite value and then is ramped linearly with time. Two qualitative criteria are identified that distinguish the catch bond from the slip bond. First, the rupture force probability density of the catch-bond exhibits a maximum-minimum pair, which develops at finite forces. In contrast, the slip bond produces a maximum that first appears at zero force. Second, the catch bond can be identified over a wide range of ramp rates by high rupture probabilities at low forces relative to the probability at the maximum, in contrast to the slip bond, where the probability at the maximum always corresponds to the most likely rupture force. Both distinctive features of the catch bond are masked by large jump forces, indicating that the catch bond is best identified in experiments with moderate loading rates and small jump forces. The catch-bond lifetime in the constant force regime is related to the probability density in the jump-ramp regime, allowing one to determine the bond lifetime for a constant force by measuring the initial probability density in the jump-ramp experiments with different jump forces and a fixed ramp rate. The key analytic results are illustrated with the P -selectin/P-selectin glucoprotein ligand-1 bond.

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Year:  2005        PMID: 16089930     DOI: 10.1103/PhysRevE.72.010903

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  16 in total

1.  The two-pathway model of the biological catch-bond as a limit of the allosteric model.

Authors:  Yuriy V Pereverzev; Eugenia Prezhdo; Evgeni V Sokurenko
Journal:  Biophys J       Date:  2011-10-19       Impact factor: 4.033

2.  Catch-bond behavior of bacteria binding by slip bonds.

Authors:  Oscar Björnham; Ove Axner
Journal:  Biophys J       Date:  2010-09-08       Impact factor: 4.033

3.  Bayesian Uncertainty Quantification for Bond Energies and Mobilities Using Path Integral Analysis.

Authors:  Joshua C Chang; Pak-Wing Fok; Tom Chou
Journal:  Biophys J       Date:  2015-09-01       Impact factor: 4.033

4.  The two-pathway model for the catch-slip transition in biological adhesion.

Authors:  Yuriy V Pereverzev; Oleg V Prezhdo; Manu Forero; Evgeni V Sokurenko; Wendy E Thomas
Journal:  Biophys J       Date:  2005-06-10       Impact factor: 4.033

5.  A structure-based sliding-rebinding mechanism for catch bonds.

Authors:  Jizhong Lou; Cheng Zhu
Journal:  Biophys J       Date:  2006-12-01       Impact factor: 4.033

6.  Dissociation of biological catch-bond by periodic perturbation.

Authors:  Yuriy V Pereverzev; Oleg V Prezhdo
Journal:  Biophys J       Date:  2006-05-12       Impact factor: 4.033

7.  Selectin catch-slip kinetics encode shear threshold adhesive behavior of rolling leukocytes.

Authors:  Michael T Beste; Daniel A Hammer
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-18       Impact factor: 11.205

8.  Rupture of multiple catch-slip bonds: Two-state two-pathway catch-slip bonds.

Authors:  V K Gupta
Journal:  Eur Phys J E Soft Matter       Date:  2013-11-26       Impact factor: 1.890

9.  Catch-bond model derived from allostery explains force-activated bacterial adhesion.

Authors:  Wendy Thomas; Manu Forero; Olga Yakovenko; Lina Nilsson; Paolo Vicini; Evgeni Sokurenko; Viola Vogel
Journal:  Biophys J       Date:  2005-11-04       Impact factor: 4.033

Review 10.  Catch-bond mechanism of force-enhanced adhesion: counterintuitive, elusive, but ... widespread?

Authors:  Evgeni V Sokurenko; Viola Vogel; Wendy E Thomas
Journal:  Cell Host Microbe       Date:  2008-10-16       Impact factor: 21.023

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