Literature DB >> 1608967

Crystallization and preliminary x-ray diffraction analysis of P450terp and the hemoprotein domain of P450BM-3, enzymes belonging to two distinct classes of the cytochrome P450 superfamily.

S S Boddupalli1, C A Hasemann, K G Ravichandran, J Y Lu, E J Goldsmith, J Deisenhofer, J A Peterson.   

Abstract

Cytochromes P450 are members of a superfamily of hemoproteins that are involved in the metabolism of various physiologic and xenobiotic organic compounds. This superfamily of proteins can be divided into two classes based on the electron donor proximal to the P450: an iron-sulfur protein for class I P450s or a flavoprotein for class II. The only known tertiary structure of any of the cytochromes P450 is that of P450cam, a class I soluble enzyme isolated from Pseudomonas putida (product of the CYP101 gene). To understand the details of the structure-function relationships within and between the two classes, structural studies on additional cytochromes P450 are crucial. We report here characterization of the crystal forms of two soluble, bacterial enzymes: cytochrome P450terp [class I enzyme from a Pseudomonas species (product of CYP108 gene)] and the hemoprotein domain of cytochrome P450BM-3 [class II enzyme from Bacillus megaterium (product of the CYP102 gene)]. The crystals of cytochrome P450terp are hexagonal and belong to the space group P6(1)22 (or its enantiomorph, P6(5)22) with unit cell dimensions a = b = 68.9 A and c = 458.7 A. The crystals of the hemoprotein domain of cytochrome P450BM-3 are monoclinic and belong to the space group P2(1) with unit cell dimensions a = 59.4 A, b = 154.0 A, c = 62.2 A, and beta = 94.7 degrees. Diffraction data for the crystals of these two proteins were obtained to a resolution better than 2.2 A. Assuming the presence of two molecules in the asymmetric unit for the hemoprotein domain of P450BM-3 and one molecule for P450terp, the calculated values of Vm are 2.6 and 3.3 A3/Da, respectively.

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Year:  1992        PMID: 1608967      PMCID: PMC49333          DOI: 10.1073/pnas.89.12.5567

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  29 in total

1.  Modeling of mammalian P450s on basis of P450cam X-ray structure.

Authors:  T L Poulos
Journal:  Methods Enzymol       Date:  1991       Impact factor: 1.600

2.  A predicted three-dimensional structure of human cytochrome P450: implications for substrate specificity.

Authors:  M J Zvelebil; C R Wolf; M J Sternberg
Journal:  Protein Eng       Date:  1991-02

3.  Protein measurement with the Folin phenol reagent.

Authors:  O H LOWRY; N J ROSEBROUGH; A L FARR; R J RANDALL
Journal:  J Biol Chem       Date:  1951-11       Impact factor: 5.157

Review 4.  Oxygen reduction by the P450 monoxygenase systems.

Authors:  I C Gunsalus; S G Sligar
Journal:  Adv Enzymol Relat Areas Mol Biol       Date:  1978

5.  Crystalline cytochrome P-450cam.

Authors:  C Yu; I C Gunsalus
Journal:  Biochem Biophys Res Commun       Date:  1970-09-30       Impact factor: 3.575

6.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

7.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

8.  Fatty acid monooxygenation by cytochrome P-450BM-3.

Authors:  S S Boddupalli; R W Estabrook; J A Peterson
Journal:  J Biol Chem       Date:  1990-03-15       Impact factor: 5.157

9.  Bioregulation of binding and dynamics: the cytochrome P-450CAM model.

Authors:  I C Gunsalus; P K Bhattacharyya; K Suhara
Journal:  Curr Top Cell Regul       Date:  1985

Review 10.  The P450 superfamily: update on new sequences, gene mapping, and recommended nomenclature.

Authors:  D W Nebert; D R Nelson; M J Coon; R W Estabrook; R Feyereisen; Y Fujii-Kuriyama; F J Gonzalez; F P Guengerich; I C Gunsalus; E F Johnson
Journal:  DNA Cell Biol       Date:  1991 Jan-Feb       Impact factor: 3.311

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  6 in total

1.  A multi-step strategy to obtain crystals of the dengue virus RNA-dependent RNA polymerase that diffract to high resolution.

Authors:  Thai Leong Yap; Yen Liang Chen; Ting Xu; Daying Wen; Subhash G Vasudevan; Julien Lescar
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-01-17

2.  Spectroscopic characterization of a newly isolated cytochrome P450 from Rhodococcus rhodochrous.

Authors:  L Banci; I Bertini; L D Eltis; R Pierattelli
Journal:  Biophys J       Date:  1993-08       Impact factor: 4.033

3.  Conservation of a functionally important surface region between two families of the cytochrome P-450 superfamily.

Authors:  B P Murray; R J Edwards; D S Davies; A R Boobis
Journal:  Biochem J       Date:  1993-05-15       Impact factor: 3.857

4.  A single active-site mutation of P450BM-3 dramatically enhances substrate binding and rate of product formation.

Authors:  Donovan C Haines; Amita Hegde; Baozhi Chen; Weiqiang Zhao; Muralidhar Bondlela; John M Humphreys; David A Mullin; Diana R Tomchick; Mischa Machius; Julian A Peterson
Journal:  Biochemistry       Date:  2011-09-06       Impact factor: 3.162

5.  Kinetics of electron transfer in the complex of cytochrome P450 3A4 with the flavin domain of cytochrome P450BM-3 as evidence of functional heterogeneity of the heme protein.

Authors:  Harshica Fernando; James R Halpert; Dmitri R Davydov
Journal:  Arch Biochem Biophys       Date:  2007-12-07       Impact factor: 4.013

6.  Methylene Oxidation of Alkyl Sulfates by Cytochrome P450BM-3 and a Role for Conformational Selection in Substrate Recognition.

Authors:  F Peter Guengerich; Mostafa I Fekry
Journal:  ACS Catal       Date:  2020-04-02       Impact factor: 13.084

  6 in total

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