Literature DB >> 16089574

Multicellular tumor spheroid in an off-lattice Voronoi-Delaunay cell model.

Gernot Schaller1, Michael Meyer-Hermann.   

Abstract

We study multicellular tumor spheroids by introducing a new three-dimensional agent-based Voronoi-Delaunay hybrid model. In this model, the cell shape varies from spherical in thin solution to convex polyhedral in dense tissues. The next neighbors of the cells are provided by a weighted Delaunay triangulation with on average linear computational complexity. The cellular interactions include direct elastic forces and cell-cell as well as cell-matrix adhesion. The spatiotemporal distribution of two nutrients--oxygen and glucose--is described by reaction-diffusion equations. Viable cells consume the nutrients, which are converted into biomass by increasing the cell size during the G1 phase. We test hypotheses on the functional dependence of the uptake rates and use computer simulations to find suitable mechanisms for the induction of necrosis. This is done by comparing the outcome with experimental growth curves, where the best fit leads to an unexpected ratio of oxygen and glucose uptake rates. The model relies on physical quantities and can easily be generalized towards tissues involving different cell types. In addition, it provides many features that can be directly compared with the experiment.

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Year:  2005        PMID: 16089574     DOI: 10.1103/PhysRevE.71.051910

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  43 in total

1.  A Mechanistic Collective Cell Model for Epithelial Colony Growth and Contact Inhibition.

Authors:  Sebastian Aland; Haralambos Hatzikirou; John Lowengrub; Axel Voigt
Journal:  Biophys J       Date:  2015-10-06       Impact factor: 4.033

2.  Modeling the influence of the E-cadherin-beta-catenin pathway in cancer cell invasion: a multiscale approach.

Authors:  Ignacio Ramis-Conde; Dirk Drasdo; Alexander R A Anderson; Mark A J Chaplain
Journal:  Biophys J       Date:  2008-03-13       Impact factor: 4.033

Review 3.  A review of spatial computational models for multi-cellular systems, with regard to intestinal crypts and colorectal cancer development.

Authors:  Giovanni De Matteis; Alex Graudenzi; Marco Antoniotti
Journal:  J Math Biol       Date:  2012-05-08       Impact factor: 2.259

4.  Individual-based and continuum models of growing cell populations: a comparison.

Authors:  Helen Byrne; Dirk Drasdo
Journal:  J Math Biol       Date:  2008-10-08       Impact factor: 2.259

Review 5.  Cellular modeling of cancer invasion: integration of in silico and in vitro approaches.

Authors:  Yoonseok Kam; Katarzyna A Rejniak; Alexander R A Anderson
Journal:  J Cell Physiol       Date:  2012-02       Impact factor: 6.384

6.  Individual cell-based models of tumor-environment interactions: Multiple effects of CD97 on tumor invasion.

Authors:  Joerg Galle; Doreen Sittig; Isabelle Hanisch; Manja Wobus; Elke Wandel; Markus Loeffler; Gabriela Aust
Journal:  Am J Pathol       Date:  2006-11       Impact factor: 4.307

7.  From single cells to tissue architecture-a bottom-up approach to modelling the spatio-temporal organisation of complex multi-cellular systems.

Authors:  J Galle; M Hoffmann; G Aust
Journal:  J Math Biol       Date:  2008-04-02       Impact factor: 2.259

8.  Tracing the footsteps of autophagy in computational biology.

Authors:  Dipanka Tanu Sarmah; Nandadulal Bairagi; Samrat Chatterjee
Journal:  Brief Bioinform       Date:  2021-07-20       Impact factor: 11.622

9.  Emergent properties of tumor microenvironment in a real-life model of multicell tumor spheroids.

Authors:  Edoardo Milotti; Roberto Chignola
Journal:  PLoS One       Date:  2010-11-30       Impact factor: 3.240

10.  A framework for modeling the growth and development of neurons and networks.

Authors:  Frederic Zubler; Rodney Douglas
Journal:  Front Comput Neurosci       Date:  2009-11-20       Impact factor: 2.380

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