Literature DB >> 16089470

Hydrogen bonding and cooperativity in isolated and hydrated sugars: mannose, galactose, glucose, and lactose.

Pierre Carçabal1, Rebecca A Jockusch, Isabel Hünig, Lavina C Snoek, Romano T Kroemer, Benjamin G Davis, David P Gamblin, Isabelle Compagnon, Jos Oomens, John P Simons.   

Abstract

The conformation of phenyl-substituted monosaccharides (mannose, galactose, and glucose) and their singly hydrated complexes has been investigated in the gas phase by means of a combination of mass selected, conformer specific ultraviolet and infrared double resonance hole burning spectroscopy experiments, and ab initio quantum chemistry calculations. In each case, the water molecule inserts into the carbohydrate at a position where it can replace a weak intramolecular interaction by two stronger intermolecular hydrogen bonds. The insertion can produce significant changes in the conformational preferences of the carbohydrates, and there is a clear preference for structures where cooperative effects enhance the stability of the monosaccharide conformers to which the water molecule chooses to bind. The conclusions drawn from the study of monosaccharide-water complexes are extended to the disaccharide lactose and discussed in the light of the underlying mechanisms that may be involved in the binding of carbohydrate assemblies to proteins and the involvement, or not, of key structural water molecules.

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Year:  2005        PMID: 16089470     DOI: 10.1021/ja0518575

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  16 in total

1.  Thermochemistry of microhydration of sodiated and potassiated monosaccharides.

Authors:  Henryk Wincel
Journal:  J Am Soc Mass Spectrom       Date:  2011-06-23       Impact factor: 3.109

2.  Predicting the preferred conformations of luteolin-4'-O-β-D-glucoside in gas phase: a comparison of two computational approaches.

Authors:  Yongzhi Li; Xiuhua Liu; Dong Chen; Zhichao Wei; Bo Liu
Journal:  J Mol Model       Date:  2013-06-09       Impact factor: 1.810

3.  Intramolecular hydrogen-bonding in aqueous carbohydrates as a cause or consequence of conformational preferences: a molecular dynamics study of cellobiose stereoisomers.

Authors:  Dongqi Wang; Maria Lovísa Ámundadóttir; Wilfred F van Gunsteren; Philippe H Hünenberger
Journal:  Eur Biophys J       Date:  2013-05-10       Impact factor: 1.733

4.  Performance of four different force fields for simulations of dipeptide conformations: GlyGly, GlyGly-, GlyGly · Cl-, GlyGly · Na+ and GlyGly · (H2O)2.

Authors:  Chen Dong; Li Yong-Zhi; Wei Zhi-Chao; Liu Bo
Journal:  J Mol Model       Date:  2014-05-27       Impact factor: 1.810

5.  Elucidating the multiple structures of pipecolic acid by rotational spectroscopy.

Authors:  A Simão; C Cabezas; I León; E R Alonso; S Mata; J L Alonso
Journal:  Phys Chem Chem Phys       Date:  2019-02-20       Impact factor: 3.676

6.  Iterative design of a helically folded aromatic oligoamide sequence for the selective encapsulation of fructose.

Authors:  Nagula Chandramouli; Yann Ferrand; Guillaume Lautrette; Brice Kauffmann; Cameron David Mackereth; Michel Laguerre; Didier Dubreuil; Ivan Huc
Journal:  Nat Chem       Date:  2015-03-16       Impact factor: 24.427

7.  Vacuum ultraviolet action spectroscopy of polysaccharides.

Authors:  Quentin Enjalbert; Claire Brunet; Arnaud Vernier; Abdul-Rahman Allouche; Rodolphe Antoine; Philippe Dugourd; Jérôme Lemoine; Alexandre Giuliani; Laurent Nahon
Journal:  J Am Soc Mass Spectrom       Date:  2013-05-31       Impact factor: 3.109

8.  Anomeric and rotameric preferences of glucopyranose in vacuo, water and organic solvents.

Authors:  Sedat Karabulut; Jerzy Leszczynski
Journal:  J Mol Model       Date:  2013-06-12       Impact factor: 1.810

9.  The origins of femtomolar protein-ligand binding: hydrogen-bond cooperativity and desolvation energetics in the biotin-(strept)avidin binding site.

Authors:  Jason DeChancie; K N Houk
Journal:  J Am Chem Soc       Date:  2007-04-07       Impact factor: 15.419

10.  Molecular recognition in glycolaldehyde, the simplest sugar: two isolated hydrogen bonds win over one cooperative pair.

Authors:  Jonas Altnöder; Juhyon J Lee; Katharina E Otto; Martin A Suhm
Journal:  ChemistryOpen       Date:  2012-10-12       Impact factor: 2.911

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