Literature DB >> 16087890

Three-dimensional structure of the quorum-quenching N-acyl homoserine lactone hydrolase from Bacillus thuringiensis.

Dali Liu1, Bryan W Lepore, Gregory A Petsko, Pei W Thomas, Everett M Stone, Walter Fast, Dagmar Ringe.   

Abstract

The three-dimensional structure of the N-acyl-l-homoserine lactone hydrolase (AHL lactonase) from Bacillus thuringiensis has been determined, by using single-wavelength anomalous dispersion (SAD) phasing, to 1.6-angstroms resolution. AHLs are produced by many Gram-negative bacteria as signaling molecules used in quorum-sensing pathways that indirectly sense cell density and regulate communal behavior. Because of their importance in pathogenicity, quorum-sensing pathways have been suggested as potential targets for the development of novel therapeutics. Quorum-sensing can be disrupted by enzymes evolved to degrade these lactones, such as AHL lactonases. These enzymes are members of the metallo-beta-lactamase superfamily and contain two zinc ions in their active sites. The zinc ions are coordinated to a number of ligands, including a single oxygen of a bridging carboxylate and a bridging water/hydroxide ion, thought to be the nucleophile that hydrolyzes the AHLs to ring-opened products, which can no longer act as quorum signals.

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Year:  2005        PMID: 16087890      PMCID: PMC1187999          DOI: 10.1073/pnas.0505255102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  41 in total

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Authors:  A A Vaguine; J Richelle; S J Wodak
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-01-01

2.  Proteins in organic solvents.

Authors:  C Mattos; D Ringe
Journal:  Curr Opin Struct Biol       Date:  2001-12       Impact factor: 6.809

Review 3.  Expansion of the zinc metallo-hydrolase family of the beta-lactamase fold.

Authors:  H Daiyasu; K Osaka; Y Ishino; H Toh
Journal:  FEBS Lett       Date:  2001-08-10       Impact factor: 4.124

Review 4.  Expanding the model: anisotropic displacement parameters in protein structure refinement.

Authors:  E A Merritt
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-06

Review 5.  Sociomicrobiology: the connections between quorum sensing and biofilms.

Authors:  Matthew R Parsek; E P Greenberg
Journal:  Trends Microbiol       Date:  2005-01       Impact factor: 17.079

6.  Quorum sensing: a transcriptional regulatory system involved in the pathogenicity of Burkholderia mallei.

Authors:  Ricky L Ulrich; David Deshazer; Harry B Hines; Jeffrey A Jeddeloh
Journal:  Infect Immun       Date:  2004-11       Impact factor: 3.441

Review 7.  Regulation of gene expression by cell-to-cell communication: acyl-homoserine lactone quorum sensing.

Authors:  C Fuqua; M R Parsek; E P Greenberg
Journal:  Annu Rev Genet       Date:  2001       Impact factor: 16.830

8.  Automated MAD and MIR structure solution.

Authors:  T C Terwilliger; J Berendzen
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-04

9.  Metal binding Asp-120 in metallo-beta-lactamase L1 from Stenotrophomonas maltophilia plays a crucial role in catalysis.

Authors:  James D Garrity; Anne L Carenbauer; Lissa R Herron; Michael W Crowder
Journal:  J Biol Chem       Date:  2003-10-22       Impact factor: 5.157

10.  AiiA, an enzyme that inactivates the acylhomoserine lactone quorum-sensing signal and attenuates the virulence of Erwinia carotovora.

Authors:  Y H Dong; J L Xu; X Z Li; L H Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2000-03-28       Impact factor: 11.205

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  41 in total

1.  MomL, a novel marine-derived N-acyl homoserine lactonase from Muricauda olearia.

Authors:  Kaihao Tang; Ying Su; Gilles Brackman; Fangyuan Cui; Yunhui Zhang; Xiaochong Shi; Tom Coenye; Xiao-Hua Zhang
Journal:  Appl Environ Microbiol       Date:  2014-11-14       Impact factor: 4.792

Review 2.  Divergence and convergence in enzyme evolution: parallel evolution of paraoxonases from quorum-quenching lactonases.

Authors:  Mikael Elias; Dan S Tawfik
Journal:  J Biol Chem       Date:  2011-11-08       Impact factor: 5.157

Review 3.  The multiple signaling systems regulating virulence in Pseudomonas aeruginosa.

Authors:  Pol Nadal Jimenez; Gudrun Koch; Jessica A Thompson; Karina B Xavier; Robbert H Cool; Wim J Quax
Journal:  Microbiol Mol Biol Rev       Date:  2012-03       Impact factor: 11.056

4.  Identification of the critical role of Tyr-194 in the catalytic activity of a novel N-acyl-homoserine lactonase from marine Bacillus cereus strain Y2.

Authors:  X Lu; Y Yuan; X-L Xue; G-P Zhang; S-N Zhou
Journal:  Curr Microbiol       Date:  2006-09-12       Impact factor: 2.188

5.  The CphAII protein from Aquifex aeolicus exhibits a metal-dependent phosphodiesterase activity.

Authors:  Michaël Kupper; Cédric Bauvois; Jean-Marie Frère; Kurt Hoffmann; Moreno Galleni; Carine Bebrone
Journal:  Extremophiles       Date:  2011-10-19       Impact factor: 2.395

6.  Synthesis of a 2'-Se-thymidine phosphoramidite and its incorporation into oligonucleotides for crystal structure study.

Authors:  Jia Sheng; Jiansheng Jiang; Jozef Salon; Zhen Huang
Journal:  Org Lett       Date:  2007-01-31       Impact factor: 6.005

Review 7.  Quorum-quenching microbial infections: mechanisms and implications.

Authors:  Y-h Dong; L-y Wang; L-H Zhang
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2007-07-29       Impact factor: 6.237

8.  A phenylalanine clamp controls substrate specificity in the quorum-quenching metallo-γ-lactonase from Bacillus thuringiensis.

Authors:  Ce Feng Liu; Dali Liu; Jessica Momb; Pei W Thomas; Ashley Lajoie; Gregory A Petsko; Walter Fast; Dagmar Ringe
Journal:  Biochemistry       Date:  2013-02-20       Impact factor: 3.162

9.  The quorum-quenching metallo-gamma-lactonase from Bacillus thuringiensis exhibits a leaving group thio effect.

Authors:  Jessica Momb; Pei W Thomas; Robert M Breece; David L Tierney; Walter Fast
Journal:  Biochemistry       Date:  2006-11-07       Impact factor: 3.162

10.  The quorum-quenching N-acyl homoserine lactone acylase PvdQ is an Ntn-hydrolase with an unusual substrate-binding pocket.

Authors:  Marcel Bokhove; Pol Nadal Jimenez; Wim J Quax; Bauke W Dijkstra
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-22       Impact factor: 11.205

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