Literature DB >> 16085410

Epigenetic inheritance in Arabidopsis: selective silence.

Daniel Zilberman1, Steven Henikoff.   

Abstract

Eukaryotic organisms have the remarkable ability to inherit states of gene activity without altering the underlying DNA sequence. This epigenetic inheritance can persist over thousands of years, providing an alternative to genetic mutations as a substrate for natural selection. Epigenetic inheritance might be propagated by differences in DNA methylation, post-translational histone modifications, and deposition of histone variants. Mounting evidence also indicates that small interfering RNA (siRNA)-mediated mechanisms play central roles in setting up and maintaining states of gene activity. Much of the epigenetic machinery of many organisms, including Arabidopsis, appears to be directed at silencing viruses and transposable elements, with epigenetic regulation of endogenous genes being mostly derived from such processes.

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Year:  2005        PMID: 16085410     DOI: 10.1016/j.gde.2005.07.002

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  16 in total

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3.  Bioinformatic prediction and experimental validation of a microRNA-directed tandem trans-acting siRNA cascade in Arabidopsis.

Authors:  Ho-Ming Chen; Yi-Hang Li; Shu-Hsing Wu
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4.  Profiling the repertoire of phenotypes influenced by environmental cues that occur during asexual reproduction.

Authors:  Aviv Dombrovsky; Laury Arthaud; Terence N Ledger; Sophie Tares; Alain Robichon
Journal:  Genome Res       Date:  2009-07-27       Impact factor: 9.043

Review 5.  Epigenetics and its implications for ecotoxicology.

Authors:  Michiel B Vandegehuchte; Colin R Janssen
Journal:  Ecotoxicology       Date:  2011-03-22       Impact factor: 2.823

6.  DRD1-Pol V-dependent self-silencing of an exogenous silencer restricts the non-cell autonomous silencing of an endogenous target gene.

Authors:  Li Dong; Meng Liu; Yuan-Yuan Fang; Jian-Hua Zhao; Xiang-Feng He; Xiao-Bao Ying; Yi-Yue Zhang; Qi Xie; Nam-Hai Chua; Hui-Shan Guo
Journal:  Plant J       Date:  2011-08-30       Impact factor: 6.417

Review 7.  The CRISPR system: small RNA-guided defense in bacteria and archaea.

Authors:  Fedor V Karginov; Gregory J Hannon
Journal:  Mol Cell       Date:  2010-01-15       Impact factor: 17.970

Review 8.  Comprehensive Catalog of Currently Documented Histone Modifications.

Authors:  Yingming Zhao; Benjamin A Garcia
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-09-01       Impact factor: 10.005

9.  Heritable epigenetic mutation of a transposon-flanked Arabidopsis gene due to lack of the chromatin-remodeling factor DDM1.

Authors:  Hidetoshi Saze; Tetsuji Kakutani
Journal:  EMBO J       Date:  2007-07-12       Impact factor: 11.598

10.  Natural selection on gene function drives the evolution of LTR retrotransposon families in the rice genome.

Authors:  Regina S Baucom; James C Estill; Jim Leebens-Mack; Jeffrey L Bennetzen
Journal:  Genome Res       Date:  2008-11-24       Impact factor: 9.043

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