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Literature DB >> 16082581

Characterization and primer development for amplification of chloroplast microsatellite regions of Fraxinus excelsior.

M E Harbourne¹, G C Douglas, S Waldren, T R Hodkinson.

Abstract

This study reports the characterization of chloroplast DNA (cpDNA) variation of Fraxinus excelsior at five loci and the successful development of primer pairs for the amplification of three of these containing mononucleotide microsatellites. We detected high levels of haplotype variation among provenances of Fraxinus around Europe and within Ireland.

Entities: Chemical Species

Mesh：

Substances：
DNA Primers

Year: 2005 PMID： 16082581 DOI： 10.1007/s10265-005-0223-5

Source DB: PubMed Journal: J Plant Res ISSN： 0918-9440 Impact factor: 2.629

11 in total

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Authors: E Wallander; V A Albert
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Authors: M Heuertz; J F Hausman; I Tsvetkov; N Frascaria-Lacoste; X Vekemans
Journal: Mol Ecol Date: 2001-07 Impact factor: 6.185

3. Estimating seed vs. pollen dispersal from spatial genetic structure in the common ash.

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4. Nuclear microsatellites reveal contrasting patterns of genetic structure between western and southeastern European populations of the common ash (Fraxinus excelsior L.).

Authors: Myriam Heuertz; Jean-François Hausman; Olivier J Hardy; Giovanni G Vendramin; Nathalie Frascaria-Lacoste; Xavier Vekemans
Journal: Evolution Date: 2004-05 Impact factor: 3.694

5. Chloroplast DNA variation and postglacial recolonization of common ash (Fraxinus excelsior L.) in Europe.

Authors: M Heuertz; S Fineschi; M Anzidei; R Pastorelli; D Salvini; L Paule; N Frascaria-Lacoste; O J Hardy; X Vekemans; G G Vendramin
Journal: Mol Ecol Date: 2004-11 Impact factor: 6.185

6. Universal primers for amplification of three non-coding regions of chloroplast DNA.

Authors: P Taberlet; L Gielly; G Pautou; J Bouvet
Journal: Plant Mol Biol Date: 1991-11 Impact factor: 4.076

7. The use of dna sequencing (ITS and trnL-F), AFLP, and fluorescent in situ hybridization to study allopolyploid Miscanthus (Poaceae).

Authors: Trevor R Hodkinson; Mark W Chase; Chigusa Takahashi; Ilia J Leitch; Michael D Bennett; Stephen A Renvoize
Journal: Am J Bot Date: 2002-02 Impact factor: 3.844

8. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors: J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal: Nucleic Acids Res Date: 1997-12-15 Impact factor: 16.971

9. Maternal inheritance of a chloroplast microsatellite marker in controlled hybrids between Fraxinus excelsior and Fraxinus angustifolia.

Authors: M E Morand-Prieur; F Vedel; C Raquin; S Brachet; D Sihachakr; N Frascaria-Lacoste
Journal: Mol Ecol Date: 2002-03 Impact factor: 6.185

3. Identification of new polymorphic regions and differentiation of cultivated olives (Olea europaea L.) through plastome sequence comparison.

Authors: Roberto Mariotti; Nicolò G M Cultrera; Concepcion Muñoz Díez; Luciana Baldoni; Andrea Rubini
Journal: BMC Plant Biol Date: 2010-09-24 Impact factor: 4.215

3 in total