Literature DB >> 16081801

Changes in replication, nuclear location, and expression of the Igh locus after fusion of a pre-B cell line with a T cell line.

Jie Zhou1, Shireen Saleque, Olga Ermakova, Manuel A Sepulveda, Qiaoxin Yang, Laurel A Eckhardt, Carl L Schildkraut, Barbara K Birshtein.   

Abstract

We have previously observed that replication and nuclear location of the murine Igh locus are developmentally regulated during B cell differentiation. In non-B, B, and plasma cells, sequences near the 3' end of the Igh locus replicate early in S while upstream Vh sequences replicate late in S, and the Igh locus is located near the nuclear periphery. In fact, in MEL non-B cells, replication of a 500-kb segment containing Igh-C and flanking sequences occurs progressively later throughout S by 3' to 5' unidirectional fork movement. In contrast, in pro- and pre-B cells, the entire 3-Mb Igh locus is located away from the nuclear periphery and replicates early in S by forks progressing in both directions. In this study, using an 18-81 (pre-B) x BW5147 (T) cell fusion system in which Igh expression is extinguished, we found that in all Igh alleles, Vh sequences replicated later in S than 3' Igh sequences (similar to that detected in BW5147), but the Igh locus was situated away from the nuclear periphery (similar to that observed in 18-81). Thus, pre-B cell-derived Igh genes had changes in replication timing, but not in nuclear location, whereas T cell-derived Igh genes changed their nuclear location but not their replication timing. These data are consistent with the silencing of a pre-B cell-specific replication program in the fusion hybrid cells and independent regulation of the nuclear location of Igh loci.

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Year:  2005        PMID: 16081801      PMCID: PMC2724393          DOI: 10.4049/jimmunol.175.4.2317

Source DB:  PubMed          Journal:  J Immunol        ISSN: 0022-1767            Impact factor:   5.422


  16 in total

1.  Evidence that a single replication fork proceeds from early to late replicating domains in the IgH locus in a non-B cell line.

Authors:  O V Ermakova; L H Nguyen; R D Little; C Chevillard; R Riblet; N Ashouian; B K Birshtein; C L Schildkraut
Journal:  Mol Cell       Date:  1999-03       Impact factor: 17.970

2.  Subnuclear compartmentalization of immunoglobulin loci during lymphocyte development.

Authors:  Steven T Kosak; Jane A Skok; Kay L Medina; Roy Riblet; Michelle M Le Beau; Amanda G Fisher; Harinder Singh
Journal:  Science       Date:  2002-04-05       Impact factor: 47.728

3.  Replication and subnuclear location dynamics of the immunoglobulin heavy-chain locus in B-lineage cells.

Authors:  Jie Zhou; Olga V Ermakova; Roy Riblet; Barbara K Birshtein; Carl L Schildkraut
Journal:  Mol Cell Biol       Date:  2002-07       Impact factor: 4.272

4.  Heritable gene silencing in lymphocytes delays chromatid resolution without affecting the timing of DNA replication.

Authors:  Véronique Azuara; Karen E Brown; Ruth R E Williams; Natasha Webb; Niall Dillon; Richard Festenstein; Veronica Buckle; Matthias Merkenschlager; Amanda G Fisher
Journal:  Nat Cell Biol       Date:  2003-07       Impact factor: 28.824

5.  B cell-specific loss of histone 3 lysine 9 methylation in the V(H) locus depends on Pax5.

Authors:  Kristen Johnson; David L Pflugh; Duonan Yu; David G T Hesslein; Kuo-I Lin; Alfred L M Bothwell; Andrei Thomas-Tikhonenko; David G Schatz; Kathryn Calame
Journal:  Nat Immunol       Date:  2004-07-18       Impact factor: 25.606

6.  Asynchronous replication of imprinted genes is established in the gametes and maintained during development.

Authors:  I Simon; T Tenzen; B E Reubinoff; D Hillman; J R McCarrey; H Cedar
Journal:  Nature       Date:  1999-10-28       Impact factor: 49.962

7.  The origin of a developmentally regulated Igh replicon is located near the border of regulatory domains for Igh replication and expression.

Authors:  Jie Zhou; Nasrin Ashouian; Marc Delepine; Fumihiko Matsuda; Christophe Chevillard; Roy Riblet; Carl L Schildkraut; Barbara K Birshtein
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-07       Impact factor: 11.205

8.  Pax5 induces V-to-DJ rearrangements and locus contraction of the immunoglobulin heavy-chain gene.

Authors:  Martin Fuxa; Jane Skok; Abdallah Souabni; Giorgia Salvagiotto; Esther Roldan; Meinrad Busslinger
Journal:  Genes Dev       Date:  2004-02-15       Impact factor: 11.361

9.  Genes activated in the presence of an immunoglobulin enhancer or promoter are negatively regulated by a T-lymphoma cell line.

Authors:  D M Zaller; H Yu; L A Eckhardt
Journal:  Mol Cell Biol       Date:  1988-05       Impact factor: 4.272

10.  Delineation of DNA replication time zones by fluorescence in situ hybridization.

Authors:  S Selig; K Okumura; D C Ward; H Cedar
Journal:  EMBO J       Date:  1992-03       Impact factor: 11.598

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  5 in total

Review 1.  Chromatin structure and replication origins: determinants of chromosome replication and nuclear organization.

Authors:  Owen K Smith; Mirit I Aladjem
Journal:  J Mol Biol       Date:  2014-06-04       Impact factor: 5.469

2.  The role of CTCF binding sites in the 3' immunoglobulin heavy chain regulatory region.

Authors:  Barbara K Birshtein
Journal:  Front Genet       Date:  2012-11-16       Impact factor: 4.599

3.  DNA replication fading as proliferating cells advance in their commitment to terminal differentiation.

Authors:  Monturus Ma Estefanía; Olivier Ganier; Pablo Hernández; Jorge B Schvartzman; Marcel Mechali; Dora B Krimer
Journal:  Sci Rep       Date:  2012-02-20       Impact factor: 4.379

Review 4.  Epigenetic Regulation of Individual Modules of the immunoglobulin heavy chain locus 3' Regulatory Region.

Authors:  Barbara K Birshtein
Journal:  Front Immunol       Date:  2014-04-21       Impact factor: 7.561

5.  High-resolution mapping of h1 linker histone variants in embryonic stem cells.

Authors:  Kaixiang Cao; Nathalie Lailler; Yunzhe Zhang; Ashwath Kumar; Karan Uppal; Zheng Liu; Eva K Lee; Hongwei Wu; Magdalena Medrzycki; Chenyi Pan; Po-Yi Ho; Guy P Cooper; Xiao Dong; Christoph Bock; Eric E Bouhassira; Yuhong Fan
Journal:  PLoS Genet       Date:  2013-04-25       Impact factor: 5.917

  5 in total

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