Literature DB >> 16051633

Sensing and signalling in response to oxygen deprivation in plants and other organisms.

Julia Bailey-Serres1, Ruth Chang.   

Abstract

AIMS AND SCOPE: All aerobic organisms require molecular di-oxygen (O2) for efficient production of ATP though oxidative phosphorylation. Cellular depletion of oxygen results in rapid molecular and physiological acclimation. The purpose of this review is to consider the processes of low oxygen sensing and response in diverse organisms, with special consideration of plant cells.
CONCLUSIONS: The sensing of oxygen deprivation in bacteria, fungi, metazoa and plants involves multiple sensors and signal transduction pathways. Cellular responses result in a reprogramming of gene expression and metabolic processes that enhance transient survival and can enable long-term tolerance to sub-optimal oxygen levels. The mechanism of sensing can involve molecules that directly bind or react with oxygen (direct sensing), or recognition of altered cellular homeostasis (indirect sensing). The growing knowledge of the activation of genes in response to oxygen deprivation has provided additional information on the response and acclimation processes. Conservation of calcium fluxes and reactive oxygen species as second messengers in signal transduction pathways in metazoa and plants may reflect the elemental importance of rapid sensing of cellular restriction in oxygen by aerobic organisms.

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Year:  2005        PMID: 16051633      PMCID: PMC4247021          DOI: 10.1093/aob/mci206

Source DB:  PubMed          Journal:  Ann Bot        ISSN: 0305-7364            Impact factor:   4.357


  103 in total

Review 1.  Multiple paths of sugar-sensing and a sugar/oxygen overlap for genes of sucrose and ethanol metabolism.

Authors:  K E Koch; Z Ying; Y Wu; W T Avigne
Journal:  J Exp Bot       Date:  2000-02       Impact factor: 6.992

2.  RopGAP4-dependent Rop GTPase rheostat control of Arabidopsis oxygen deprivation tolerance.

Authors:  Airica Baxter-Burrell; Zhenbiao Yang; Patricia S Springer; Julia Bailey-Serres
Journal:  Science       Date:  2002-06-14       Impact factor: 47.728

Review 3.  ROP/RAC GTPase: an old new master regulator for plant signaling.

Authors:  Ying Gu; Zonghua Wang; Zhenbiao Yang
Journal:  Curr Opin Plant Biol       Date:  2004-10       Impact factor: 7.834

4.  Targeting of HIF-alpha to the von Hippel-Lindau ubiquitylation complex by O2-regulated prolyl hydroxylation.

Authors:  P Jaakkola; D R Mole; Y M Tian; M I Wilson; J Gielbert; S J Gaskell; A von Kriegsheim; H F Hebestreit; M Mukherji; C J Schofield; P H Maxwell; C W Pugh; P J Ratcliffe
Journal:  Science       Date:  2001-04-05       Impact factor: 47.728

5.  Hypoxic but not anoxic stabilization of HIF-1alpha requires mitochondrial reactive oxygen species.

Authors:  Clara Schroedl; David S McClintock; G R Scott Budinger; Navdeep S Chandel
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2002-11       Impact factor: 5.464

6.  Phosphorylation of 1-aminocyclopropane-1-carboxylic acid synthase by MPK6, a stress-responsive mitogen-activated protein kinase, induces ethylene biosynthesis in Arabidopsis.

Authors:  Yidong Liu; Shuqun Zhang
Journal:  Plant Cell       Date:  2004-11-11       Impact factor: 11.277

7.  Redistribution of intracellular oxygen in hypoxia by nitric oxide: effect on HIF1alpha.

Authors:  Thilo Hagen; Cormac T Taylor; Francis Lam; Salvador Moncada
Journal:  Science       Date:  2003-12-12       Impact factor: 47.728

8.  Differential mRNA translation contributes to gene regulation under non-stress and dehydration stress conditions in Arabidopsis thaliana.

Authors:  Riki Kawaguchi; Thomas Girke; Elizabeth A Bray; Julia Bailey-Serres
Journal:  Plant J       Date:  2004-06       Impact factor: 6.417

9.  The roles of ethylene, auxin, abscisic acid, and gibberellin in the hyponastic growth of submerged Rumex palustris petioles.

Authors:  Marjolein C H Cox; Joris J Benschop; Robert A M Vreeburg; Cornelis A M Wagemaker; Thomas Moritz; Anton J M Peeters; Laurentius A C J Voesenek
Journal:  Plant Physiol       Date:  2004-10-01       Impact factor: 8.340

10.  Elevation of cytosolic calcium precedes anoxic gene expression in maize suspension-cultured cells.

Authors:  C C Subbaiah; D S Bush; M M Sachs
Journal:  Plant Cell       Date:  1994-12       Impact factor: 11.277

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  60 in total

1.  Prolyl 4-hydroxylase genes are subjected to alternative splicing in roots of maize seedlings under waterlogging.

Authors:  Xiling Zou; Yuanyuan Jiang; Yonglian Zheng; Meidong Zhang; Zuxin Zhang
Journal:  Ann Bot       Date:  2011-10-03       Impact factor: 4.357

2.  Response and adaptation by plants to flooding stress.

Authors:  M B Jackson; T D Colmer
Journal:  Ann Bot       Date:  2005-09       Impact factor: 4.357

3.  Mitochondrial reactive oxygen species. Contribution to oxidative stress and interorganellar signaling.

Authors:  David M Rhoads; Ann L Umbach; Chalivendra C Subbaiah; James N Siedow
Journal:  Plant Physiol       Date:  2006-06       Impact factor: 8.340

4.  Musings about the effects of environment on photosynthesis.

Authors:  David W Lawlor
Journal:  Ann Bot       Date:  2009-02       Impact factor: 4.357

5.  The membrane-bound NAC transcription factor ANAC013 functions in mitochondrial retrograde regulation of the oxidative stress response in Arabidopsis.

Authors:  Inge De Clercq; Vanessa Vermeirssen; Olivier Van Aken; Klaas Vandepoele; Monika W Murcha; Simon R Law; Annelies Inzé; Sophia Ng; Aneta Ivanova; Debbie Rombaut; Brigitte van de Cotte; Pinja Jaspers; Yves Van de Peer; Jaakko Kangasjärvi; James Whelan; Frank Van Breusegem
Journal:  Plant Cell       Date:  2013-09-17       Impact factor: 11.277

6.  Submergence-responsive MicroRNAs are potentially involved in the regulation of morphological and metabolic adaptations in maize root cells.

Authors:  Zuxin Zhang; Liya Wei; Xilin Zou; Yongsheng Tao; Zhijie Liu; Yonglian Zheng
Journal:  Ann Bot       Date:  2008-07-31       Impact factor: 4.357

Review 7.  Rice germination and seedling growth in the absence of oxygen.

Authors:  Leonardo Magneschi; Pierdomenico Perata
Journal:  Ann Bot       Date:  2008-07-25       Impact factor: 4.357

8.  The heat-inducible transcription factor HsfA2 enhances anoxia tolerance in Arabidopsis.

Authors:  Valeria Banti; Fabrizio Mafessoni; Elena Loreti; Amedeo Alpi; Pierdomenico Perata
Journal:  Plant Physiol       Date:  2010-01-20       Impact factor: 8.340

9.  Transcript and metabolite profiling of the adaptive response to mild decreases in oxygen concentration in the roots of arabidopsis plants.

Authors:  Joost T van Dongen; Anja Fröhlich; Santiago J Ramírez-Aguilar; Nicolas Schauer; Alisdair R Fernie; Alexander Erban; Joachim Kopka; Jeremy Clark; Anke Langer; Peter Geigenberger
Journal:  Ann Bot       Date:  2008-07-25       Impact factor: 4.357

10.  Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis.

Authors:  Dov Moldovan; Andrew Spriggs; Jun Yang; Barry J Pogson; Elizabeth S Dennis; Iain W Wilson
Journal:  J Exp Bot       Date:  2010       Impact factor: 6.992

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