Literature DB >> 16040268

White matter tractography by anisotropic wavefront evolution and diffusion tensor imaging.

Marcel Jackowski1, Chiu Yen Kao, Maolin Qiu, R Todd Constable, Lawrence H Staib.   

Abstract

Determination of axonal pathways provides an invaluable means to study the connectivity of the human brain and its functional network. Diffusion tensor imaging (DTI) is unique in its ability to capture the restricted diffusion of water molecules which can be used to infer the directionality of tissue components. In this paper, we introduce a white matter tractography method based on anisotropic wavefront propagation in diffusion tensor images. A front propagates in the white matter with a speed profile governed by the isocontour of the diffusion tensor ellipsoid. By using the ellipsoid, we avoid possible misclassification of the principal eigenvector in oblate regions. The wavefront evolution is described by an anisotropic version of the static Hamilton-Jacobi equation, which is solved by a sweeping method in order to obtain correct arrival times. Pathways of connection are determined by tracing minimum-cost trajectories using the characteristic vector field of the resulting partial differential equation. A validity index is described to rate the goodness of the resulting pathways with respect to the directionality of the tensor field. Connectivity results using normal human DTI brain images are illustrated and discussed. We also compared our method with a similar level set-based tractography technique, and found that the anisotropic evolution increased the validity index of the obtained pathways by 18%.

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Year:  2005        PMID: 16040268      PMCID: PMC2839167          DOI: 10.1016/j.media.2005.05.008

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  21 in total

1.  In vivo fiber tractography using DT-MRI data.

Authors:  P J Basser; S Pajevic; C Pierpaoli; J Duda; A Aldroubi
Journal:  Magn Reson Med       Date:  2000-10       Impact factor: 4.668

Review 2.  The basis of anisotropic water diffusion in the nervous system - a technical review.

Authors:  Christian Beaulieu
Journal:  NMR Biomed       Date:  2002 Nov-Dec       Impact factor: 4.044

3.  Characterizing non-Gaussian diffusion by using generalized diffusion tensors.

Authors:  Chunlei Liu; Roland Bammer; Burak Acar; Michael E Moseley
Journal:  Magn Reson Med       Date:  2004-05       Impact factor: 4.668

4.  Q-ball imaging.

Authors:  David S Tuch
Journal:  Magn Reson Med       Date:  2004-12       Impact factor: 4.668

Review 5.  Geometric strategies for neuroanatomic analysis from MRI.

Authors:  James S Duncan; Xenophon Papademetris; Jing Yang; Marcel Jackowski; Xiaolan Zeng; Lawrence H Staib
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

6.  Three-dimensional tracking of axonal projections in the brain by magnetic resonance imaging.

Authors:  S Mori; B J Crain; V P Chacko; P C van Zijl
Journal:  Ann Neurol       Date:  1999-02       Impact factor: 10.422

7.  Microstructural and physiological features of tissues elucidated by quantitative-diffusion-tensor MRI.

Authors:  P J Basser; C Pierpaoli
Journal:  J Magn Reson B       Date:  1996-06

8.  A tension-based theory of morphogenesis and compact wiring in the central nervous system.

Authors:  D C Van Essen
Journal:  Nature       Date:  1997-01-23       Impact factor: 49.962

9.  MR diffusion tensor spectroscopy and imaging.

Authors:  P J Basser; J Mattiello; D LeBihan
Journal:  Biophys J       Date:  1994-01       Impact factor: 4.033

10.  Regularization of diffusion-based direction maps for the tracking of brain white matter fascicles.

Authors:  C Poupon; C A Clark; V Frouin; J Régis; I Bloch; D Le Bihan; J Mangin
Journal:  Neuroimage       Date:  2000-08       Impact factor: 6.556

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  22 in total

1.  Volumetric shape model for oriented tubular structure from DTI data.

Authors:  Hon Pong Ho; Xenophon Papademetris; Fei Wang; Hilary P Blumberg; Lawrence H Staib
Journal:  Med Image Comput Comput Assist Interv       Date:  2009

Review 2.  Principles and limitations of computational algorithms in clinical diffusion tensor MR tractography.

Authors:  H-W Chung; M-C Chou; C-Y Chen
Journal:  AJNR Am J Neuroradiol       Date:  2010-03-18       Impact factor: 3.825

3.  Finsler tractography for white matter connectivity analysis of the cingulum bundle.

Authors:  John Melonakos; Vandana Mohan; Marc Niethammer; Kate Smith; Marek Kubicki; Allen Tannenbaum
Journal:  Med Image Comput Comput Assist Interv       Date:  2007

4.  Locally-Constrained Region-Based Methods for DW-MRI Segmentation.

Authors:  John Melonakos; Marc Niethammer; Vandana Mohan; Marek Kubicki; James V Miller; Allen Tannenbaum
Journal:  Proc IEEE Int Conf Comput Vis       Date:  2007

5.  Brain Shape Characterization from Deformation.

Authors:  Lawrence H Staib; Marcel Jackowski; Xenophon Papademetris
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2006

6.  Localized Statistics for DW-MRI Fiber Bundle Segmentation.

Authors:  Shawn Lankton; John Melonakos; James Malcolm; Samuel Dambreville; Allen Tannenbaum
Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit       Date:  2008

7.  Diffusion tensor imaging in autism spectrum disorders: preliminary evidence of abnormal neural connectivity.

Authors:  Roger J Jou; Andrea P Jackowski; Xenophon Papademetris; Nallakkandi Rajeevan; Lawrence H Staib; Fred R Volkmar
Journal:  Aust N Z J Psychiatry       Date:  2010-12-06       Impact factor: 5.744

8.  Fasciculography: robust prior-free real-time normalized volumetric neural tract parcellation.

Authors:  Hon Pong Ho; Fei Wang; Xenophon Papademetris; Hilary P Blumberg; Lawrence H Staib
Journal:  IEEE Trans Med Imaging       Date:  2011-09-12       Impact factor: 10.048

9.  A Hough transform global probabilistic approach to multiple-subject diffusion MRI tractography.

Authors:  Iman Aganj; Christophe Lenglet; Neda Jahanshad; Essa Yacoub; Noam Harel; Paul M Thompson; Guillermo Sapiro
Journal:  Med Image Anal       Date:  2011-01-26       Impact factor: 8.545

10.  Improved segmentation of white matter tracts with adaptive Riemannian metrics.

Authors:  Xiang Hao; Kristen Zygmunt; Ross T Whitaker; P Thomas Fletcher
Journal:  Med Image Anal       Date:  2013-10-25       Impact factor: 8.545

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