Literature DB >> 16034533

Structure and function of plant-type ferredoxins.

Keiichi Fukuyama1.   

Abstract

The plant-type ferredoxins (Fds) are the [2Fe-2S] proteins that function primarily in photosynthesis; they transfer electrons from photoreduced Photosystem I to ferredoxin NADP(+) reductase in which NADPH is produced for CO(2) assimilation. In addition, Fds partition electrons to various ferredoxin-dependent enzymes not only for assimilations of inorganic nitrogen and sulfur and N(2) fixation but also for regulation of CO(2) assimilation cycle. Although Fds are small iron-sulfur proteins with molecular weight of 11 KDa, they are expected to interact with surprisingly many enzymes. Several Fd isoforms were found in non-photosynthetic cells as well as Fds in photosynthetic cells, leading to the recognition that they have differentiated physiological roles. In a quarter of century, X-ray crystallography and NMR spectroscopy provided wealth of structural data, which shed light on the structure-function relationship of the plant-type Fds and gave structural basis for the biochemical and spectroscopic properties so far accumulated. Thus the structural studies of Fds have come to a new era in which different roles of Fds and interactions with various enzymes are clarified on the basis of the tertiary and quaternary structures, although they are premature at present. This article reviews briefly the structures of the plant-type Fds together with their functions, properties, and interactions with Fd related enzymes. Lastly the folding motif of Fd, that has grown to be a large family by including many functionally unrelated proteins, is noted.

Entities:  

Year:  2004        PMID: 16034533     DOI: 10.1023/B:PRES.0000036882.19322.0a

Source DB:  PubMed          Journal:  Photosynth Res        ISSN: 0166-8595            Impact factor:   3.573


  66 in total

1.  Comparison of the electrostatic binding sites on the surface of ferredoxin for two ferredoxin-dependent enzymes, ferredoxin-NADP(+) reductase and sulfite reductase.

Authors:  T Akashi; T Matsumura; T Ideguchi; K Iwakiri; T Kawakatsu; I Taniguchi; T Hase
Journal:  J Biol Chem       Date:  1999-10-08       Impact factor: 5.157

2.  The crystal structure of Trichomonas vaginalis ferredoxin provides insight into metronidazole activation.

Authors:  Chetlen R Crossnoe; Juris P Germanas; Pierre LeMagueres; Gabriela Mustata; Kurt L Krause
Journal:  J Mol Biol       Date:  2002-04-26       Impact factor: 5.469

Review 3.  Ferredoxin-dependent chloroplast enzymes.

Authors:  D B Knaff; M Hirasawa
Journal:  Biochim Biophys Acta       Date:  1991-01-22

4.  Refined X-ray structures of the oxidized, at 1.3 A, and reduced, at 1.17 A, [2Fe-2S] ferredoxin from the cyanobacterium Anabaena PCC7119 show redox-linked conformational changes.

Authors:  R Morales; M H Charon; G Hudry-Clergeon; Y Pétillot; S Norager; M Medina; M Frey
Journal:  Biochemistry       Date:  1999-11-30       Impact factor: 3.162

5.  Complex formation between ferredoxin triphosphopyridine nucleotide reductase and electron transfer proteins.

Authors:  G P Foust; S G Mayhew; V Massey
Journal:  J Biol Chem       Date:  1969-02-10       Impact factor: 5.157

6.  Localization of ferredoxin isoproteins in mesophyll and bundle sheath cells in maize leaf.

Authors:  Y Kimata; T Hase
Journal:  Plant Physiol       Date:  1989-04       Impact factor: 8.340

7.  A post genomic characterization of Arabidopsis ferredoxins.

Authors:  Guy Thomas Hanke; Yoko Kimata-Ariga; Isao Taniguchi; Toshiharu Hase
Journal:  Plant Physiol       Date:  2003-12-18       Impact factor: 8.340

8.  Binding of ferredoxin to ferredoxin:NADP+ oxidoreductase: the role of carboxyl groups, electrostatic surface potential, and molecular dipole moment.

Authors:  A R De Pascalis; I Jelesarov; F Ackermann; W H Koppenol; M Hirasawa; D B Knaff; H R Bosshard
Journal:  Protein Sci       Date:  1993-07       Impact factor: 6.725

Review 9.  Structure-function studies of [2Fe-2S] ferredoxins.

Authors:  H M Holden; B L Jacobson; J K Hurley; G Tollin; B H Oh; L Skjeldal; Y K Chae; H Cheng; B Xia; J L Markley
Journal:  J Bioenerg Biomembr       Date:  1994-02       Impact factor: 2.945

10.  Phthalate dioxygenase reductase: a modular structure for electron transfer from pyridine nucleotides to [2Fe-2S].

Authors:  C C Correll; C J Batie; D P Ballou; M L Ludwig
Journal:  Science       Date:  1992-12-04       Impact factor: 47.728

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  31 in total

1.  Modular electron transfer circuits for synthetic biology: insulation of an engineered biohydrogen pathway.

Authors:  Christina M Agapakis; Pamela A Silver
Journal:  Bioeng Bugs       Date:  2010 Nov-Dec

2.  Allostery in the ferredoxin protein motif does not involve a conformational switch.

Authors:  Rachel Nechushtai; Heiko Lammert; Dorit Michaeli; Yael Eisenberg-Domovich; John A Zuris; Maria A Luca; Dominique T Capraro; Alex Fish; Odelia Shimshon; Melinda Roy; Alexander Schug; Paul C Whitford; Oded Livnah; José N Onuchic; Patricia A Jennings
Journal:  Proc Natl Acad Sci U S A       Date:  2011-01-25       Impact factor: 11.205

3.  Oxidized and reduced [2Fe-2S] clusters from an iron(I) synthon.

Authors:  Megan E Reesbeck; Meghan M Rodriguez; William W Brennessel; Brandon Q Mercado; David Vinyard; Patrick L Holland
Journal:  J Biol Inorg Chem       Date:  2015-06-05       Impact factor: 3.358

Review 4.  Metalloproteins containing cytochrome, iron-sulfur, or copper redox centers.

Authors:  Jing Liu; Saumen Chakraborty; Parisa Hosseinzadeh; Yang Yu; Shiliang Tian; Igor Petrik; Ambika Bhagi; Yi Lu
Journal:  Chem Rev       Date:  2014-04-23       Impact factor: 60.622

Review 5.  Evolution of Chlamydomonas reinhardtii ferredoxins and their interactions with [FeFe]-hydrogenases.

Authors:  Anne Sawyer; Martin Winkler
Journal:  Photosynth Res       Date:  2017-06-15       Impact factor: 3.573

6.  Near-infrared in vitro measurements of photosystem I cofactors and electron-transfer partners with a recently developed spectrophotometer.

Authors:  Pierre Sétif; Alain Boussac; Anja Krieger-Liszkay
Journal:  Photosynth Res       Date:  2019-09-03       Impact factor: 3.573

7.  Photosynthetic acclimation to drought stress in Agave salmiana Otto ex Salm-Dyck seedlings is largely dependent on thermal dissipation and enhanced electron flux to photosystem I.

Authors:  Huitziméngari Campos; Carlos Trejo; Cecilia B Peña-Valdivia; Rodolfo García-Nava; F Víctor Conde-Martínez; Ma Del Rocío Cruz-Ortega
Journal:  Photosynth Res       Date:  2014-05-06       Impact factor: 3.573

8.  Crystal structure of phycocyanobilin:ferredoxin oxidoreductase in complex with biliverdin IXalpha, a key enzyme in the biosynthesis of phycocyanobilin.

Authors:  Yoshinori Hagiwara; Masakazu Sugishima; Yasuhiro Takahashi; Keiichi Fukuyama
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-27       Impact factor: 11.205

9.  Characterization of the key step for light-driven hydrogen evolution in green algae.

Authors:  Martin Winkler; Sebastian Kuhlgert; Michael Hippler; Thomas Happe
Journal:  J Biol Chem       Date:  2009-10-21       Impact factor: 5.157

10.  Pattern of expression and substrate specificity of chloroplast ferredoxins from Chlamydomonas reinhardtii.

Authors:  Aimee M Terauchi; Shu-Fen Lu; Mirko Zaffagnini; Shane Tappa; Masakazu Hirasawa; Jatindra N Tripathy; David B Knaff; Patrick J Farmer; Stéphane D Lemaire; Toshiharu Hase; Sabeeha S Merchant
Journal:  J Biol Chem       Date:  2009-07-07       Impact factor: 5.157

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