Literature DB >> 16019216

Rediscovery of known natural compounds: nuisance or goldmine?

Martin Tulp1, Lars Bohlin.   

Abstract

Do all natural compounds have a distinct biological activity, or are most of them merely biosynthetic debris? Many natural compounds have important biological functions, and certainly many more of the ample 200,000 currently known will ultimately prove to be more than just 'secondary metabolites'. The question is how to select the most promising candidates for potential new drugs. 'Rediscovery' of known natural compounds is regarded as a nuisance or disappointment by scientists involved with the identification of novel compounds. The other side of the coin, however, is that the discovery that a particular compound occurs in unrelated species can be a valuable clue toward the identification of a novel receptor or enzyme. Here, we put forward the hypothesis that when a natural compound occurs in unrelated species, it must have an important biological function by interacting with a specific molecular target. This is because it is extremely improbable that in nature one particular compound is synthesized in totally unrelated species for no reason at all. For many compounds occurring in unrelated species, it is already known that they act on specific molecular targets. For others, it is just known that they occur in different species. In some cases, biological activities are known but not the underlying mechanisms of action. It is from this category of compounds that important discoveries are likely to be made. Some (around 70) of them were identified. They represent important clues from nature offering an alternative approach to the classical screening of large numbers of compounds.

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Year:  2005        PMID: 16019216     DOI: 10.1016/j.bmc.2005.05.067

Source DB:  PubMed          Journal:  Bioorg Med Chem        ISSN: 0968-0896            Impact factor:   3.641


  16 in total

Review 1.  Natural products as chemical probes.

Authors:  Erin E Carlson
Journal:  ACS Chem Biol       Date:  2010-07-16       Impact factor: 5.100

Review 2.  Natural compounds as next-generation herbicides.

Authors:  Franck E Dayan; Stephen O Duke
Journal:  Plant Physiol       Date:  2014-04-30       Impact factor: 8.340

3.  High-throughput virtual screening of phloroglucinol derivatives against HIV-reverse transcriptase.

Authors:  Vilas Belekar; Anup Shah; Prabha Garg
Journal:  Mol Divers       Date:  2013-01-22       Impact factor: 2.943

4.  Discovery of indolotryptoline antiproliferative agents by homology-guided metagenomic screening.

Authors:  Fang-Yuan Chang; Sean F Brady
Journal:  Proc Natl Acad Sci U S A       Date:  2013-01-09       Impact factor: 11.205

5.  Dragon exploration system on marine sponge compounds interactions.

Authors:  Sunil Sagar; Mandeep Kaur; Aleksandar Radovanovic; Vladimir B Bajic
Journal:  J Cheminform       Date:  2013-02-16       Impact factor: 5.514

6.  A quorum sensing regulated small volatile molecule reduces acute virulence and promotes chronic infection phenotypes.

Authors:  Meenu Kesarwani; Ronen Hazan; Jianxin He; Yok-Ai Que; Yokai Que; Yiorgos Apidianakis; Biliana Lesic; Gaoping Xiao; Valérie Dekimpe; Sylvain Milot; Eric Deziel; François Lépine; Laurence G Rahme
Journal:  PLoS Pathog       Date:  2011-08-04       Impact factor: 6.823

7.  SuperNatural: a searchable database of available natural compounds.

Authors:  Mathias Dunkel; Melanie Fullbeck; Stefanie Neumann; Robert Preissner
Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

8.  Unexplored hypersaline habitats are sources of novel actinomycetes.

Authors:  Polpass Arul Jose; Solomon Robinson David Jebakumar
Journal:  Front Microbiol       Date:  2014-05-27       Impact factor: 5.640

9.  Diversity of Gene Clusters for Polyketide and Nonribosomal Peptide Biosynthesis Revealed by Metagenomic Analysis of the Yellow Sea Sediment.

Authors:  Yongjun Wei; Lei Zhang; Zhihua Zhou; Xing Yan
Journal:  Front Microbiol       Date:  2018-02-27       Impact factor: 5.640

10.  Novel Natural Products for Healthy Ageing from the Mediterranean Diet and Food Plants of Other Global Sources-The MediHealth Project.

Authors:  Birgit Waltenberger; Maria Halabalaki; Stefan Schwaiger; Nicolas Adamopoulos; Noureddine Allouche; Bernd L Fiebich; Nina Hermans; Pidder Jansen-Dürr; Victor Kesternich; Luc Pieters; Stefan Schönbichler; Alexios-Leandros Skaltsounis; Hung Tran; Ioannis P Trougakos; Alvaro Viljoen; Jean-Luc Wolfender; Christian Wolfrum; Nikos Xynos; Hermann Stuppner
Journal:  Molecules       Date:  2018-05-06       Impact factor: 4.411

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