Literature DB >> 16018551

New ways to admire zebrafish: progress in functional genomics research methodology.

Cathleen Teh1, Serguei Parinov, Vladimir Korzh.   

Abstract

The main challenge of the post-genomic era is to functionally characterize genes identified by the genome sequencing projects. Model organisms, including zebrafish, are indispensable for this demanding task. Zebrafish has been successfully incorporated into large-scale genetic screens due to the optical clarity of the embryos and their accessibility to various experimental techniques throughout development. The attractiveness of the zebrafish as a model organism is enhanced by the availability of continuously improving genomic tools and methodologies for functional characterization of the gene. This article will highlight the current techniques used in the field, with the focus on transgenesis.

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Year:  2005        PMID: 16018551     DOI: 10.2144/05386RV01

Source DB:  PubMed          Journal:  Biotechniques        ISSN: 0736-6205            Impact factor:   1.993


  8 in total

1.  Targeting the zebrafish optic tectum using in vivo electroporation.

Authors:  Kenric J Hoegler; John H Horne
Journal:  Cold Spring Harb Protoc       Date:  2010-07-01

2.  Zebrafish Expression Ontology of Gene Sets (ZEOGS): a tool to analyze enrichment of zebrafish anatomical terms in large gene sets.

Authors:  Sergey V Prykhozhij; Annalisa Marsico; Sebastiaan H Meijsing
Journal:  Zebrafish       Date:  2013-05-08       Impact factor: 1.985

3.  Prion protein function and the disturbance of early embryonic development in zebrafish.

Authors:  Mohasina Syed; Rasoul Nourizadeh-Lillabadi; Charles McL Press; Peter Alestrøm
Journal:  Prion       Date:  2011-04-01       Impact factor: 3.931

4.  The temporal resolution of in vivo electroporation in zebrafish: a method for time-resolved loss of function.

Authors:  Scott A Kera; Suneel M Agerwala; John H Horne
Journal:  Zebrafish       Date:  2010-03       Impact factor: 1.985

Review 5.  A primer for morpholino use in zebrafish.

Authors:  Brent R Bill; Andrew M Petzold; Karl J Clark; Lisa A Schimmenti; Stephen C Ekker
Journal:  Zebrafish       Date:  2009-03       Impact factor: 1.985

6.  Targeting olfactory bulb neurons using combined in vivo electroporation and Gal4-based enhancer trap zebrafish lines.

Authors:  Kenric J Hoegler; Martin Distel; Reinhard W Köster; John H Horne
Journal:  J Vis Exp       Date:  2011-08-15       Impact factor: 1.355

7.  Comparative genomics of the syndecans defines an ancestral genomic context associated with matrilins in vertebrates.

Authors:  Ritu Chakravarti; Josephine C Adams
Journal:  BMC Genomics       Date:  2006-04-18       Impact factor: 3.969

8.  Novel insights into the genetic controls of primitive and definitive hematopoiesis from zebrafish models.

Authors:  Raman Sood; Paul Liu
Journal:  Adv Hematol       Date:  2012-07-25
  8 in total

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