Literature DB >> 16014461

Transfer of Pectobacterium chrysanthemi (Burkholder et al. 1953) Brenner et al. 1973 and Brenneria paradisiaca to the genus Dickeya gen. nov. as Dickeya chrysanthemi comb. nov. and Dickeya paradisiaca comb. nov. and delineation of four novel species, Dickeya dadantii sp. nov., Dickeya dianthicola sp. nov., Dickeya dieffenbachiae sp. nov. and Dickeya zeae sp. nov.

Régine Samson1, Jean Bernard Legendre1, Richard Christen2, Marion Fischer-Le Saux1, Wafa Achouak3, Louis Gardan1.   

Abstract

A collection of 75 strains of Pectobacterium chrysanthemi (including all biovars and pathovars) and the type strains of Brenneria paradisiaca (CFBP 4178(T)) and Pectobacterium cypripedii (CFBP 3613(T)) were studied by DNA-DNA hybridization, numerical taxonomy of 121 phenotypic characteristics, serology and 16S rRNA gene-based phylogenetic analyses. From analysis of 16S rRNA gene sequences, it was deduced that P. chrysanthemi strains and B. paradisiaca CFBP 4178(T) formed a clade distinct from the genera Pectobacterium and Brenneria; therefore, it is proposed to transfer all the strains to a novel genus, Dickeya gen. nov. By DNA-DNA hybridization, the strains of P. chrysanthemi were distributed among six genomic species: genomospecies 1 harbouring 16 strains of biovar 3 and four strains of biovar 8, genomospecies 2 harbouring 16 strains of biovar 3, genomospecies 3 harbouring two strains of biovar 6 and five strains of biovar 5, genomospecies 4 harbouring five strains of biovar 2, genomospecies 5 harbouring six strains of biovar 1, four strains of biovar 7 and five strains of biovar 9 and genomospecies 6 harbouring five strains of biovar 4 and B. paradisiaca CFBP 4178(T). Two strains of biovar 3 remained unclustered. Biochemical criteria, deduced from a numerical taxonomic study of phenotypic characteristics, and serological reactions allowed discrimination of the strains belonging to the six genomic species. Thus, it is proposed that the strains clustered in these six genomic species be assigned to the species Dickeya zeae sp. nov. (type strain CFBP 2052(T)=NCPPB 2538(T)), Dickeya dadantii sp. nov. (type strain CFBP 1269(T)=NCPPB 898(T)), Dickeya chrysanthemi comb. nov. (subdivided into two biovars, bv. chrysanthemi and bv. parthenii), Dickeya dieffenbachiae sp. nov. (type strain CFBP 2051(T)=NCPPB 2976(T)), Dickeya dianthicola sp. nov. (type strain CFBP 1200(T)=NCPPB 453(T)) and Dickeya paradisiaca comb. nov., respectively.

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Year:  2005        PMID: 16014461     DOI: 10.1099/ijs.0.02791-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  88 in total

Review 1.  Top 10 plant pathogenic bacteria in molecular plant pathology.

Authors:  John Mansfield; Stephane Genin; Shimpei Magori; Vitaly Citovsky; Malinee Sriariyanum; Pamela Ronald; Max Dow; Valérie Verdier; Steven V Beer; Marcos A Machado; Ian Toth; George Salmond; Gary D Foster
Journal:  Mol Plant Pathol       Date:  2012-06-05       Impact factor: 5.663

2.  Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937.

Authors:  Jeremy D Glasner; Ching-Hong Yang; Sylvie Reverchon; Nicole Hugouvieux-Cotte-Pattat; Guy Condemine; Jean-Pierre Bohin; Frédérique Van Gijsegem; Shihui Yang; Thierry Franza; Dominique Expert; Guy Plunkett; Michael J San Francisco; Amy O Charkowski; Béatrice Py; Kenneth Bell; Lise Rauscher; Pablo Rodriguez-Palenzuela; Ariane Toussaint; Maria C Holeva; Sheng Yang He; Vanessa Douet; Martine Boccara; Carlos Blanco; Ian Toth; Bradley D Anderson; Bryan S Biehl; Bob Mau; Sarah M Flynn; Frédéric Barras; Magdalen Lindeberg; Paul R J Birch; Shinji Tsuyumu; Xiangyang Shi; Michael Hibbing; Mee-Ngan Yap; Mathilde Carpentier; Elie Dassa; Masahiro Umehara; Jihyun F Kim; Michael Rusch; Pritin Soni; George F Mayhew; Derrick E Fouts; Steven R Gill; Frederick R Blattner; Noel T Keen; Nicole T Perna
Journal:  J Bacteriol       Date:  2011-01-07       Impact factor: 3.490

3.  Iron deficiency affects plant defence responses and confers resistance to Dickeya dadantii and Botrytis cinerea.

Authors:  Nam Phuong Kieu; Aude Aznar; Diego Segond; Martine Rigault; Elizabeth Simond-Côte; Caroline Kunz; Marie-Christine Soulie; Dominique Expert; Alia Dellagi
Journal:  Mol Plant Pathol       Date:  2012-02-29       Impact factor: 5.663

4.  Conventional and real-time PCRs for detection of Erwinia piriflorinigrans allow its distinction from the fire blight pathogen, Erwinia amylovora.

Authors:  Silvia Barbé; Edson Bertolini; Montserrat Roselló; Pablo Llop; María M López
Journal:  Appl Environ Microbiol       Date:  2014-02-07       Impact factor: 4.792

5.  Characterization of an obligate intracellular bacterium in the midgut epithelium of the bulrush bug Chilacis typhae (Heteroptera, Lygaeidae, Artheneinae).

Authors:  Stefan Martin Kuechler; Konrad Dettner; Siegfried Kehl
Journal:  Appl Environ Microbiol       Date:  2011-03-04       Impact factor: 4.792

6.  Functional Chimeras of GLIC Obtained by Adding the Intracellular Domain of Anion- and Cation-Conducting Cys-Loop Receptors.

Authors:  Nelli Mnatsakanyan; Sita Nirupama Nishtala; Akash Pandhare; Mariana C Fiori; Raman Goyal; Jonathan E Pauwels; Andrew F Navetta; Afzal Ahrorov; Michaela Jansen
Journal:  Biochemistry       Date:  2015-04-17       Impact factor: 3.162

7.  Genomic overview of the phytopathogen Pectobacterium wasabiae strain RNS 08.42.1A suggests horizontal acquisition of quorum-sensing genes.

Authors:  Slimane Khayi; Yannick Raoul des Essarts; Angélique Quêtu-Laurent; Mohieddine Moumni; Valérie Hélias; Denis Faure
Journal:  Genetica       Date:  2014-10-09       Impact factor: 1.082

8.  Virulence Factor Identification in the Banana Pathogen Dickeya zeae MS2.

Authors:  Luwen Feng; Amy L Schaefer; Ming Hu; Ruiyi Chen; E Peter Greenberg; Jianuan Zhou
Journal:  Appl Environ Microbiol       Date:  2019-11-14       Impact factor: 4.792

9.  Genome sequence of the rice pathogen Dickeya zeae strain ZJU1202.

Authors:  Bin Li; Yu Shi; Muhammad Ibrahim; He Liu; Changlin Shan; Yanli Wang; Michael Kube; Guan-Lin Xie; Guochang Sun
Journal:  J Bacteriol       Date:  2012-08       Impact factor: 3.490

10.  Differential role of ferritins in iron metabolism and virulence of the plant-pathogenic bacterium Erwinia chrysanthemi 3937.

Authors:  Aïda Boughammoura; Berthold F Matzanke; Lars Böttger; Sylvie Reverchon; Emmanuel Lesuisse; Dominique Expert; Thierry Franza
Journal:  J Bacteriol       Date:  2007-12-28       Impact factor: 3.490

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