Literature DB >> 16006114

The evolution of DNA polymerases with novel activities.

Allison A Henry1, Floyd E Romesberg.   

Abstract

DNA and RNA polymerases have evolved in nature to function in specific environments with specific substrates. Thus, although the commercial availability of these enzymes has revolutionized the biotechnology industry, their applications are limited. The availability of polymerases that have unnatural properties would be of even greater utility. Towards this goal, several activity-based screening and selection approaches have been developed. Using these techniques, polymerases that synthesize a variety of different polymers, including those containing 2'-O-methyl-modified nucleotides or unnatural base pairs, have been evolved. These results suggest that polymerases tailored for any specific application could soon be available.

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Year:  2005        PMID: 16006114     DOI: 10.1016/j.copbio.2005.06.008

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  15 in total

1.  Structural factors that determine selectivity of a high fidelity DNA polymerase for deoxy-, dideoxy-, and ribonucleotides.

Authors:  Weina Wang; Eugene Y Wu; Homme W Hellinga; Lorena S Beese
Journal:  J Biol Chem       Date:  2012-05-30       Impact factor: 5.157

2.  Evolution of functional nucleic acids in the presence of nonheritable backbone heterogeneity.

Authors:  Simon G Trevino; Na Zhang; Mark P Elenko; Andrej Lupták; Jack W Szostak
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-08       Impact factor: 11.205

3.  Optimization of unnatural base pair packing for polymerase recognition.

Authors:  Shigeo Matsuda; Allison A Henry; Floyd E Romesberg
Journal:  J Am Chem Soc       Date:  2006-05-17       Impact factor: 15.419

4.  Exploiting models of molecular evolution to efficiently direct protein engineering.

Authors:  Megan F Cole; Eric A Gaucher
Journal:  J Mol Evol       Date:  2010-12-04       Impact factor: 2.395

5.  Reconstructed evolutionary adaptive paths give polymerases accepting reversible terminators for sequencing and SNP detection.

Authors:  Fei Chen; Eric A Gaucher; Nicole A Leal; Daniel Hutter; Stephanie A Havemann; Sridhar Govindarajan; Eric A Ortlund; Steven A Benner
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-11       Impact factor: 11.205

Review 6.  Learning from nature - novel synthetic biology approaches for biomaterial design.

Authors:  Anton V Bryksin; Ashley C Brown; Michael M Baksh; M G Finn; Thomas H Barker
Journal:  Acta Biomater       Date:  2014-01-24       Impact factor: 8.947

7.  Ambivalent incorporation of the fluorescent cytosine analogues tC and tCo by human DNA polymerase alpha and Klenow fragment.

Authors:  Gudrun Stengel; Byron W Purse; L Marcus Wilhelmsson; Milan Urban; Robert D Kuchta
Journal:  Biochemistry       Date:  2009-08-11       Impact factor: 3.162

8.  Diarylethene-modified nucleotides for switching optical properties in DNA.

Authors:  Sebastian Barrois; Hans-Achim Wagenknecht
Journal:  Beilstein J Org Chem       Date:  2012-06-20       Impact factor: 2.883

Review 9.  Recent progress toward the templated synthesis and directed evolution of sequence-defined synthetic polymers.

Authors:  Yevgeny Brudno; David R Liu
Journal:  Chem Biol       Date:  2009-03-27

Review 10.  DNA polymerases as useful reagents for biotechnology - the history of developmental research in the field.

Authors:  Sonoko Ishino; Yoshizumi Ishino
Journal:  Front Microbiol       Date:  2014-08-29       Impact factor: 5.640

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