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Literature DB >> 16000499

Identification of Vibrio parahaemolyticus pandemic group-specific DNA sequence by genomic subtraction.

Masatoshi Okura¹, Ro Osawa, Eiji Arakawa, Jun Terajima, Haruo Watanabe.

Abstract

A genomic subtraction between a pandemic Vibrio parahaemolyticus and a nonpandemic strain that seemed to be clonally related was performed. A subtractive DNA fragment was identified to be a part of a 16-kbp insertion sequence which was present in almost all pandemic strains but not in nonpandemic strains tested.

Entities: Disease Species

Mesh：

Substances：
DNA, Bacterial

Year: 2005 PMID： 16000499 PMCID： PMC1169085 DOI： 10.1128/JCM.43.7.3533-3536.2005

Source DB: PubMed Journal: J Clin Microbiol ISSN： 0095-1137 Impact factor: 5.948

13 in total

1. Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V cholerae.

Authors: Kozo Makino; Kenshiro Oshima; Ken Kurokawa; Katsushi Yokoyama; Takayuki Uda; Kenichi Tagomori; Yoshio Iijima; Masatomo Najima; Masayuki Nakano; Atsushi Yamashita; Yoshino Kubota; Shigenobu Kimura; Teruo Yasunaga; Takeshi Honda; Hideo Shinagawa; Masahira Hattori; Tetsuya Iida
Journal: Lancet Date: 2003-03-01 Impact factor: 79.321

Review 2. Regulation of gene expression by histone-like proteins in bacteria.

Authors: Charles J Dorman; Padraig Deighan
Journal: Curr Opin Genet Dev Date: 2003-04 Impact factor: 5.578

3. Pandemic spread of an O3:K6 clone of Vibrio parahaemolyticus and emergence of related strains evidenced by arbitrarily primed PCR and toxRS sequence analyses.

Authors: C Matsumoto; J Okuda; M Ishibashi; M Iwanaga; P Garg; T Rammamurthy; H C Wong; A Depaola; Y B Kim; M J Albert; M Nishibuchi
Journal: J Clin Microbiol Date: 2000-02 Impact factor: 5.948

4. Role of histone-like protein H-NS in multidrug resistance of Escherichia coli.

Authors: Kunihiko Nishino; Akihito Yamaguchi
Journal: J Bacteriol Date: 2004-03 Impact factor: 3.490

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Journal: J Mol Biol Date: 1990-10-05 Impact factor: 5.469

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Journal: Infect Immun Date: 1998-02 Impact factor: 3.441

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Authors: P A Blake; R E Weaver; D G Hollis
Journal: Annu Rev Microbiol Date: 1980 Impact factor: 15.500

8. PCR-based identification of pandemic group Vibrio parahaemolyticus with a novel group-specific primer pair.

Authors: Masatoshi Okura; Ro Osawa; Atsushi Iguchi; Michihiro Takagi; Eiji Arakawa; Jun Terajima; Haruo Watanabe
Journal: Microbiol Immunol Date: 2004 Impact factor: 1.955

9. Characteristics of Vibrio parahaemolyticus O3:K6 from Asia.

Authors: H C Wong; S H Liu; T K Wang; C L Lee; C S Chiou; D P Liu; M Nishibuchi; B K Lee
Journal: Appl Environ Microbiol Date: 2000-09 Impact factor: 4.792

10. Genotypic analyses of Vibrio parahaemolyticus and development of a pandemic group-specific multiplex PCR assay.

Authors: Masatoshi Okura; Ro Osawa; Atsushi Iguchi; Eiji Arakawa; Jun Terajima; Haruo Watanabe
Journal: J Clin Microbiol Date: 2003-10 Impact factor: 5.948

10 in total

Review 1. Global dissemination of Vibrio parahaemolyticus serotype O3:K6 and its serovariants.

Authors: G Balakrish Nair; Thandavarayan Ramamurthy; Sujit K Bhattacharya; Basabjit Dutta; Yoshifumi Takeda; David A Sack
Journal: Clin Microbiol Rev Date: 2007-01 Impact factor: 26.132

2. Virulence gene- and pandemic group-specific marker profiling of clinical Vibrio parahaemolyticus isolates.

Authors: Carolyn E Meador; Michele M Parsons; Cheryl A Bopp; Peter Gerner-Smidt; John A Painter; Gary J Vora
Journal: J Clin Microbiol Date: 2007-02-14 Impact factor: 5.948

3. Comparative genomic analysis using microarray demonstrates a strong correlation between the presence of the 80-kilobase pathogenicity island and pathogenicity in Kanagawa phenomenon-positive Vibrio parahaemolyticus strains.

Authors: Kaori Izutsu; Ken Kurokawa; Kosuke Tashiro; Satoru Kuhara; Tetsuya Hayashi; Takeshi Honda; Tetsuya Iida
Journal: Infect Immun Date: 2008-01-14 Impact factor: 3.441

4. Four genomic islands that mark post-1995 pandemic Vibrio parahaemolyticus isolates.

Authors: Catherine C Hurley; AnneMarie Quirke; F Jerry Reen; E Fidelma Boyd
Journal: BMC Genomics Date: 2006-05-03 Impact factor: 3.969

5. A pandemic Vibrio parahaemolyticus O3:K6 clone causing most associated diarrhea cases in the Pacific Northwest coast of Mexico.

Authors: Lucio de Jesús Hernández-Díaz; Nidia Leon-Sicairos; Jorge Velazquez-Roman; Héctor Flores-Villaseñor; Alma M Guadron-Llanos; J Javier Martinez-Garcia; Jorge E Vidal; Adrián Canizalez-Roman
Journal: Front Microbiol Date: 2015-03-24 Impact factor: 5.640

6. Insights into the environmental reservoir of pathogenic Vibrio parahaemolyticus using comparative genomics.

Authors: Tracy H Hazen; Patricia C Lafon; Nancy M Garrett; Tiffany M Lowe; Daniel J Silberger; Lori A Rowe; Michael Frace; Michele B Parsons; Cheryl A Bopp; David A Rasko; Patricia A Sobecky
Journal: Front Microbiol Date: 2015-03-24 Impact factor: 5.640

7. Characterization of Vibrio parahaemolyticus isolated from stool specimens of diarrhea patients in Nantong, Jiangsu, China during 2018-2020.

Authors: Junfang Sun; Xue Li; Zimeng Hu; Xingfan Xue; Miaomiao Zhang; Qimin Wu; Wei Zhang; Yiquan Zhang; Renfei Lu
Journal: PLoS One Date: 2022-08-26 Impact factor: 3.752