Literature DB >> 16000437

Characterization of a novel P[25],G11 human group a rotavirus.

Mustafizur Rahman1, Jelle Matthijnssens, Sharifun Nahar, Goutam Podder, David A Sack, Tasnim Azim, Marc Van Ranst.   

Abstract

A novel rotavirus strain (Dhaka6) isolated from a 21-year-old Bangladeshi male patient was characterized by sequence analysis of its VP7 and VP4 gene segments. Phylogenetic analysis of the VP7 gene of the Dhaka6 strain revealed a common evolutionary lineage with porcine G11 rotavirus strains. This isolate is the first reported G11 rotavirus strain infecting a human host. Comparison of the VP4 gene sequences with all currently recognized 24 different P genotypes revealed only low nucleotide (54 to 71%) and amino acid (52 to 76%) sequence identities. This lack of high sequence similarity in the VP4 gene indicates that the Dhaka6 isolate represents a new group A rotavirus P genotype, to which we propose assignment of the designation P[25].

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Year:  2005        PMID： 16000437      PMCID： PMC1169153          DOI： 10.1128/JCM.43.7.3208-3212.2005

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  39 in total

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Journal:  Microbiol Immunol       Date:  1993       Impact factor: 1.955

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Journal:  J Virol       Date:  1991-03       Impact factor: 5.103

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Journal:  J Clin Microbiol       Date:  1994-02       Impact factor: 5.948

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Journal:  J Clin Microbiol       Date:  1994-05       Impact factor: 5.948

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Journal:  J Clin Microbiol       Date:  1992-06       Impact factor: 5.948

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Authors:  M Ciarlet; F Liprandi
Journal:  J Clin Microbiol       Date:  1994-01       Impact factor: 5.948

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Authors:  M Ciarlet; M Hidalgo; M Gorziglia; F Liprandi
Journal:  J Gen Virol       Date:  1994-08       Impact factor: 3.891
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  36 in total

1.  Identification of group A porcine rotavirus strains bearing a novel VP4 (P) Genotype in Italian swine herds.

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Journal:  J Clin Microbiol       Date:  2006-11-22       Impact factor: 5.948

2.  Heterogeneity and temporal dynamics of evolution of G1 human rotaviruses in a settled population.

Authors:  Serenella Arista; Giovanni M Giammanco; Simona De Grazia; Stefania Ramirez; Concetta Lo Biundo; Claudia Colomba; Antonio Cascio; Vito Martella
Journal:  J Virol       Date:  2006-08-23       Impact factor: 5.103

3.  Detection and genetic characterization of group A rotavirus strains circulating among children with acute gastroenteritis in Japan.

Authors:  Tung Gia Phan; Pattara Khamrin; Trinh Duy Quang; Shuvra Kanti Dey; Sayaka Takanashi; Shoko Okitsu; Niwat Maneekarn; Hiroshi Ushijima
Journal:  J Virol       Date:  2007-02-14       Impact factor: 5.103

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Authors:  Norma Santos; Shinjiro Honma; Maria do Carmo S T Timenetsky; Alexandre C Linhares; Hiroshi Ushijima; George E Armah; Jon R Gentsch; Yasutaka Hoshino
Journal:  J Clin Microbiol       Date:  2007-12-05       Impact factor: 5.948

5.  Development and validation of DNA microarray for genotyping group A rotavirus VP4 (P[4], P[6], P[8], P[9], and P[14]) and VP7 (G1 to G6, G8 to G10, and G12) genes.

Authors:  Shinjiro Honma; Vladimir Chizhikov; Norma Santos; Masatoshi Tatsumi; Maria do Carmo S T Timenetsky; Alexandre C Linhares; Joana D'Arc P Mascarenhas; Hiroshi Ushijima; George E Armah; Jon R Gentsch; Yasutaka Hoshino
Journal:  J Clin Microbiol       Date:  2007-06-13       Impact factor: 5.948

6.  Effect of monovalent rotavirus vaccine on rotavirus disease burden and circulating rotavirus strains among children in Morocco.

Authors:  Mohammed Benhafid; Nezha Elomari; Meryem Azzouzi Idrissi; Ahmed Rguig; Jon R Gentsch; Umesh Parashar; Rajae Elaouad
Journal:  J Med Virol       Date:  2015-03-05       Impact factor: 2.327

7.  FIRST MOLECULAR DETECTION AND VP7 (G) GENOTYPING OF GROUP A ROTAVIRUS BY SEMI-NESTED RT-PCR FROM SEWAGE IN NIGERIA.

Authors:  Babatunde Olanrewaju Motayo; Adekunle Johnson Adeniji; Adedayo Omotayo Faneye
Journal:  Rev Inst Med Trop Sao Paulo       Date:  2016-11-03       Impact factor: 1.846

8.  Prevalence of G2P[4] and G12P[6] rotavirus, Bangladesh.

Authors:  Mustafizur Rahman; Rasheda Sultana; Giasuddin Ahmed; Sharifun Nahar; Zahid M Hassan; Farjana Saiada; Goutam Podder; Abu S G Faruque; A K Siddique; David A Sack; Jelle Matthijnssens; Marc Van Ranst; Tasnim Azim
Journal:  Emerg Infect Dis       Date:  2007-01       Impact factor: 6.883

9.  Identification of a G2-like porcine rotavirus bearing a novel VP4 type, P[32].

Authors:  Patrick J Collins; Vito Martella; Canio Buonavoglia; Helen O'Shea
Journal:  Vet Res       Date:  2010-07-29       Impact factor: 3.683

10.  Emergence of G12 rotavirus strains in Delhi, India, in 2000 to 2007.

Authors:  S Sharma; P Ray; J R Gentsch; R I Glass; V Kalra; M K Bhan
Journal:  J Clin Microbiol       Date:  2008-02-13       Impact factor: 5.948
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