Literature DB >> 15994905

Areas of molecules in membranes consisting of mixtures.

Olle Edholm1, John F Nagle.   

Abstract

The question has arisen in recent literature: how to partition the total area in simulations of membranes consisting of more than one kind of molecule into average areas for each kind of molecule. Several definitions have been proposed, each of which has arbitrary features. When applied to mixtures of cholesterol and DPPC, these definitions give different results. This note recalls that physical chemistry provides a canonical way to define molecular area, in analogy to the definition of partial-specific volume. Results for partial-specific area are obtained from simulations of DPPC/cholesterol bilayers and compared to the results from the other recent definitions. The partial-specific-area formalism dramatically demonstrates the condensing effect of cholesterol and this leads to the introduction of a specific model that accounts for the area of mixtures of cholesterol and lipid over the entire range of cholesterol concentrations.

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Year:  2005        PMID: 15994905      PMCID: PMC1262641          DOI: 10.1529/biophysj.105.064329

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  22 in total

1.  Lessons of slicing membranes: interplay of packing, free area, and lateral diffusion in phospholipid/cholesterol bilayers.

Authors:  Emma Falck; Michael Patra; Mikko Karttunen; Marja T Hyvönen; Ilpo Vattulainen
Journal:  Biophys J       Date:  2004-08       Impact factor: 4.033

2.  Molecular dynamics simulation of dipalmitoylphosphatidylcholine membrane with cholesterol sulfate.

Authors:  A M Smondyrev; M L Berkowitz
Journal:  Biophys J       Date:  2000-04       Impact factor: 4.033

Review 3.  Structure of lipid bilayers.

Authors:  J F Nagle; S Tristram-Nagle
Journal:  Biochim Biophys Acta       Date:  2000-11-10

4.  Cholesterol effects on the phosphatidylcholine bilayer polar region: a molecular simulation study.

Authors:  M Pasenkiewicz-Gierula; T Róg; K Kitamura; A Kusumi
Journal:  Biophys J       Date:  2000-03       Impact factor: 4.033

5.  Sphingomyelin-cholesterol domains in phospholipid membranes: atomistic simulation.

Authors:  Sagar A Pandit; S Vasudevan; S W Chiu; R Jay Mashl; Eric Jakobsson; H L Scott
Journal:  Biophys J       Date:  2004-08       Impact factor: 4.033

6.  Lipid chains and cholesterol in model membranes: a Monte Carlo Study.

Authors:  H L Scott; S Kalaskar
Journal:  Biochemistry       Date:  1989-05-02       Impact factor: 3.162

7.  Cholesterol-induced modifications in lipid bilayers: a simulation study.

Authors:  S W Chiu; Eric Jakobsson; R Jay Mashl; H Larry Scott
Journal:  Biophys J       Date:  2002-10       Impact factor: 4.033

8.  Structure of gel phase DMPC determined by X-ray diffraction.

Authors:  Stephanie Tristram-Nagle; Yufeng Liu; Justin Legleiter; John F Nagle
Journal:  Biophys J       Date:  2002-12       Impact factor: 4.033

9.  Lecithin bilayers. Density measurement and molecular interactions.

Authors:  J F Nagle; D A Wilkinson
Journal:  Biophys J       Date:  1978-08       Impact factor: 4.033

10.  Phase equilibria of cholesterol/dipalmitoylphosphatidylcholine mixtures: 2H nuclear magnetic resonance and differential scanning calorimetry.

Authors:  M R Vist; J H Davis
Journal:  Biochemistry       Date:  1990-01-16       Impact factor: 3.162

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  69 in total

1.  Gradual change or phase transition: characterizing fluid lipid-cholesterol membranes on the basis of thermal volume changes.

Authors:  Heiko Heerklotz; Alekos Tsamaloukas
Journal:  Biophys J       Date:  2006-04-21       Impact factor: 4.033

Review 2.  Macromolecules that prefer their membranes curvy.

Authors:  Kerwyn Casey Huang; Kumaran S Ramamurthi
Journal:  Mol Microbiol       Date:  2010-04-25       Impact factor: 3.501

3.  Atomic-scale structure and electrostatics of anionic palmitoyloleoylphosphatidylglycerol lipid bilayers with Na+ counterions.

Authors:  Wei Zhao; Tomasz Róg; Andrey A Gurtovenko; Ilpo Vattulainen; Mikko Karttunen
Journal:  Biophys J       Date:  2006-11-17       Impact factor: 4.033

4.  Toward a mathematical model of the assembly and disassembly of membrane microdomains: comparison with experimental models.

Authors:  G Richardson; L J Cummings; H J Harris; P O'Shea
Journal:  Biophys J       Date:  2007-03-23       Impact factor: 4.033

5.  Influence of cholesterol and β-sitosterol on the structure of EYPC bilayers.

Authors:  Jana Gallová; Daniela Uhríková; Norbert Kučerka; Miroslava Svorková; Sergio S Funari; Tatiana N Murugova; László Almásy; Milan Mazúr; Pavol Balgavý
Journal:  J Membr Biol       Date:  2011-08-04       Impact factor: 1.843

6.  A New Computational Method for Membrane Compressibility: Bilayer Mechanical Thickness Revisited.

Authors:  Milka Doktorova; Michael V LeVine; George Khelashvili; Harel Weinstein
Journal:  Biophys J       Date:  2019-01-03       Impact factor: 4.033

7.  How well does cholesteryl hemisuccinate mimic cholesterol in saturated phospholipid bilayers?

Authors:  Waldemar Kulig; Joona Tynkkynen; Matti Javanainen; Moutusi Manna; Tomasz Rog; Ilpo Vattulainen; Pavel Jungwirth
Journal:  J Mol Model       Date:  2014-02-14       Impact factor: 1.810

8.  Lateral organization in lipid-cholesterol mixed bilayers.

Authors:  Sagar A Pandit; George Khelashvili; Eric Jakobsson; Ananth Grama; H L Scott
Journal:  Biophys J       Date:  2006-10-27       Impact factor: 4.033

9.  Cholesterol surrogates: a comparison of cholesterol and 16:0 ceramide in POPC bilayers.

Authors:  Sagar A Pandit; See-Wing Chiu; Eric Jakobsson; Ananth Grama; H L Scott
Journal:  Biophys J       Date:  2006-10-27       Impact factor: 4.033

10.  Cholesterol slows down the lateral mobility of an oxidized phospholipid in a supported lipid bilayer.

Authors:  Birgit Plochberger; Thomas Stockner; Salvatore Chiantia; Mario Brameshuber; Julian Weghuber; Albin Hermetter; Petra Schwille; Gerhard J Schütz
Journal:  Langmuir       Date:  2010-10-13       Impact factor: 3.882

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