Literature DB >> 1599244

Evaluation of aquatic sediment microcosms and their use in assessing possible effects of introduced microorganisms on ecosystem parameters.

I Wagner-Döbler1, R Pipke, K N Timmis, D F Dwyer.   

Abstract

In this paper we describe a sediment microcosm system consisting of 20 undisturbed, layered sediment cores with overlying site water which are incubated under identical conditions of temperature, light, stirring rate of overlying water, and water exchange rate. Ecosystem parameters (nutrient level, photosynthetic potential, community structure of heterotrophic bacteria, thymidine incorporation rate, and oxygen microgradients) of the laboratory microcosms and the source ecosystem were compared and shown to be indistinguishable for the first 2 weeks. In weeks 3 and 4, small differences were detectable in the nutrient level, community structure of heterotrophic bacteria, and thymidine incorporation rate. However, the photosynthetic potential, depth profiles of heterotrophic bacterial community structure, and oxygen microgradients were maintained throughout the incubation period and did not differ between laboratory microcosms and the source ecosystem. The microcosm system described here would thus appear to be a valid model of aquatic sediments for up to 4 weeks; the actual period would depend on the sediment source and incubation temperature. The validated systems were used with Rhine river sediment to assess possible effects on ecosystem parameters of Pseudomonas sp. strain B13 FR1(pFRC20P), a genetically engineered microorganism (GEM) that had been constructed to degrade mixtures of halo- and alkylbenzoates and -phenols. The GEM survived in the surface sediment at densities of 5 x 10(4) to 5 x 10(5)/g (dry weight) for 4 weeks and degraded added chloro- and methylaromatics. The GEM did not measurably influence ecosystem parameters such as photosynthesis, densities of selected heterotrophic bacteria, thymidine incorporation rate, and oxygen microgradients. Thus, the microcosm system described here would seem to be useful for the study of the ecology of biodegradation and the fate and effect of microorganisms introduced into the environment.

Entities:  

Mesh:

Substances:

Year:  1992        PMID: 1599244      PMCID: PMC195583          DOI: 10.1128/aem.58.4.1249-1258.1992

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  22 in total

1.  Survival and function of a genetically engineered Pseudomonad in aquatic sediment microcosms.

Authors:  R Pipke; I Wagner-Döbler; K N Timmis; D F Dwyer
Journal:  Appl Environ Microbiol       Date:  1992-04       Impact factor: 4.792

2.  Genetically Engineered Erwinia carotovora: Survival, Intraspecific Competition, and Effects upon Selected Bacterial Genera.

Authors:  D R Orvos; G H Lacy; J Cairns
Journal:  Appl Environ Microbiol       Date:  1990-06       Impact factor: 4.792

3.  An improved assay for nanomole amounts of inorganic phosphate.

Authors:  P A Lanzetta; L J Alvarez; P S Reinach; O A Candia
Journal:  Anal Biochem       Date:  1979-11-15       Impact factor: 3.365

4.  Effects of 2,4-dichlorophenol, a metabolite of a genetically engineered bacterium, and 2,4-dichlorophenoxyacetate on some microorganism-mediated ecological processes in soil.

Authors:  K A Short; J D Doyle; R J King; R J Seidler; G Stotzky; R H Olsen
Journal:  Appl Environ Microbiol       Date:  1991-02       Impact factor: 4.792

5.  Increased recovery rate of salmonellae from stream bottom sediments versus surface waters.

Authors:  C W Hendricks
Journal:  Appl Microbiol       Date:  1971-02

6.  [Respiratory system assessment in most frequent pulmonary diseases by means of radiography and radioisotope method using 133Xe xenon (author's transl)].

Authors:  Z Maziarz; A Gaik; A Szymański; J Zajgner
Journal:  Pol Przegl Radiol Med Nukl       Date:  1979 Sep-Oct

7.  Factors affecting the survival and growth of bacteria introduced into lake water.

Authors:  P R Scheuerman; J P Schmidt; M Alexander
Journal:  Arch Microbiol       Date:  1988       Impact factor: 2.552

8.  Survival and catabolic activity of natural and genetically engineered bacteria in a laboratory-scale activated-sludge unit.

Authors:  N C McClure; J C Fry; A J Weightman
Journal:  Appl Environ Microbiol       Date:  1991-02       Impact factor: 4.792

9.  Microcosm for assessing survival of genetically engineered microorganisms in aquatic environments.

Authors:  J Awong; G Bitton; G R Chaudhry
Journal:  Appl Environ Microbiol       Date:  1990-04       Impact factor: 4.792

10.  Survival of Pseudomonas putida UWC1 containing cloned catabolic genes in a model activated-sludge unit.

Authors:  N C McClure; A J Weightman; J C Fry
Journal:  Appl Environ Microbiol       Date:  1989-10       Impact factor: 4.792

View more
  23 in total

1.  Removal of dibenzofuran, dibenzo-p-dioxin, and 2-chlorodibenzo-p-dioxin from soils inoculated with Sphingomonas sp. strain RW1.

Authors:  R U Halden; B G Halden; D F Dwyer
Journal:  Appl Environ Microbiol       Date:  1999-05       Impact factor: 4.792

Review 2.  Molecular mechanisms of genetic adaptation to xenobiotic compounds.

Authors:  J R van der Meer; W M de Vos; S Harayama; A J Zehnder
Journal:  Microbiol Rev       Date:  1992-12

3.  Survival and function of a genetically engineered Pseudomonad in aquatic sediment microcosms.

Authors:  R Pipke; I Wagner-Döbler; K N Timmis; D F Dwyer
Journal:  Appl Environ Microbiol       Date:  1992-04       Impact factor: 4.792

4.  Survival and activity of Pseudomonas sp. strain B13(FR1) in a marine microcosm determined by quantitative PCR and an rRNA-targeting probe and its effect on the indigenous bacterioplankton.

Authors:  T D Leser; M Boye; N B Hendriksen
Journal:  Appl Environ Microbiol       Date:  1995-04       Impact factor: 4.792

5.  Availability of O2 as a substrate in the cytoplasm of bacteria under aerobic and microaerobic conditions.

Authors:  T Arras; J Schirawski; G Unden
Journal:  J Bacteriol       Date:  1998-04       Impact factor: 3.490

6.  Structural and functional characterization of a stable, 4-chlorosalicylic-acid-degrading, bacterial community in a chemostat.

Authors:  I S Thakur
Journal:  World J Microbiol Biotechnol       Date:  1995-11       Impact factor: 3.312

7.  Cloning, nucleotide sequence, and expression of the gene encoding a novel dioxygenase involved in metabolism of carboxydiphenyl ethers in Pseudomonas pseudoalcaligenes POB310.

Authors:  U Dehmel; K H Engesser; K N Timmis; D F Dwyer
Journal:  Arch Microbiol       Date:  1995-01       Impact factor: 2.552

8.  Tetrameric structure and cellular location of catechol 2,3-dioxygenase.

Authors:  J Winkler; L D Eltis; D F Dwyer; M Rohde
Journal:  Arch Microbiol       Date:  1995-01       Impact factor: 2.552

9.  Microcosm enrichment of biphenyl-degrading microbial communities from soils and sediments.

Authors:  I Wagner-Döbler; A Bennasar; M Vancanneyt; C Strömpl; I Brümmer; C Eichner; I Grammel; E R Moore
Journal:  Appl Environ Microbiol       Date:  1998-08       Impact factor: 4.792

10.  Thermal gradient gel electrophoresis analysis of bioprotection from pollutant shocks in the activated sludge microbial community.

Authors:  C A Eichner; R W Erb; K N Timmis; I Wagner-Döbler
Journal:  Appl Environ Microbiol       Date:  1999-01       Impact factor: 4.792

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.