Literature DB >> 15991056

Characterization and transcription of the genes involved in butyrate production in Butyrivibrio fibrisolvens type I and II strains.

Narito Asanuma1, Masaya Ishiwata, Takahiro Yoshii, Masahiro Kikuchi, Youichi Nishina, Tsuneo Hino.   

Abstract

The genes in Butyrivibrio fibrisolvens that encode the enzymes involved in butyrate production were sequenced. In a type I strain (ATCC 19171(T)), the genes coding for the enzymes that catalyze the conversion from acetyl-CoA to butyryl-CoA, thl (thiolase), crt (crotonase), hbd (beta-hydroxybutyryl-CoA dehydrogenase), bcd (butyryl-CoA dehydrogenase), etfB (electron transfer flavoprotein [ETF]-beta), and etfA (ETF-alpha), were found to be clustered and arranged in this order. A type II strain (ATCC 51255) had the same clustered genes with the same arrangement, except that crt was not present in the clustered genes. The deduced amino acid sequences of these enzymes did not greatly differ between the two strains, and even between B. fibrisolvens and clostridia. Amino acid identity appeared to be higher within the same type than between types I and II. The clustered genes were shown to be cotranscribed, and constitutively transcribed without being affected significantly by culture conditions.

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Year:  2005        PMID: 15991056     DOI: 10.1007/s00284-005-4477-x

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  8 in total

1.  Characterization and transcription of the genes encoding enzymes involved in butyrate production in Butyrivibrio fibrisolvens.

Authors:  Narito Asanuma; Masaru Kawato; Sou Ohkawara; Tsuneo Hino
Journal:  Curr Microbiol       Date:  2003-09       Impact factor: 2.188

2.  Presence of Butyrivibrio fibrisolvens in the digestive tract of dogs and cats, and its contribution to butyrate production.

Authors:  Narito Asanuma; Masaru Kawato; Tsuneo Hino
Journal:  J Gen Appl Microbiol       Date:  2001-12       Impact factor: 1.452

3.  Butyrate acts as a survival factor for colonic epithelial cells: further fuel for the in vivo versus in vitro debate.

Authors:  A Hague; B Singh; C Paraskeva
Journal:  Gastroenterology       Date:  1997-03       Impact factor: 22.682

4.  Cellulolytic bacteria occurring in the rumen of sheep conditioned to low-protein teff hay.

Authors:  B S Shane; L Gouws; A Kistner
Journal:  J Gen Microbiol       Date:  1969-03

5.  Structure and transcriptional regulation of the gene encoding pyruvate formate-lyase of a ruminal bacterium, Streptococcus bovis.

Authors:  Narito Asanuma; Miwa Iwamoto; Tsuneo Hino
Journal:  Microbiology       Date:  1999-01       Impact factor: 2.777

6.  Isolation and characteristics of a wheatbran-degrading Butyrivibrio from human faeces.

Authors:  C J Rumney; S H Duncan; C Henderson; C S Stewart
Journal:  Lett Appl Microbiol       Date:  1995-04       Impact factor: 2.858

7.  Enzymology of butyrate formation by Butyrivibrio fibrisolvens.

Authors:  T L Miller; S E Jenesel
Journal:  J Bacteriol       Date:  1979-04       Impact factor: 3.490

8.  Regulation of lactate dehydrogenase synthesis in a ruminal bacterium, Streptococcus bovis.

Authors:  Narito Asanuma; Miwa Iwamoto; Tsuneo Hino
Journal:  J Gen Appl Microbiol       Date:  1997-12       Impact factor: 1.452

  8 in total
  10 in total

1.  A gnotobiotic mouse model demonstrates that dietary fiber protects against colorectal tumorigenesis in a microbiota- and butyrate-dependent manner.

Authors:  Dallas R Donohoe; Darcy Holley; Leonard B Collins; Stephanie A Montgomery; Alan C Whitmore; Andrew Hillhouse; Kaitlin P Curry; Sarah W Renner; Alicia Greenwalt; Elizabeth P Ryan; Virginia Godfrey; Mark T Heise; Deborah S Threadgill; Anna Han; James A Swenberg; David W Threadgill; Scott J Bultman
Journal:  Cancer Discov       Date:  2014-09-29       Impact factor: 39.397

2.  Nonstarch polysaccharides modulate bacterial microbiota, pathways for butyrate production, and abundance of pathogenic Escherichia coli in the pig gastrointestinal tract.

Authors:  Barbara U Metzler-Zebeli; Seema Hooda; Robert Pieper; Ruurd T Zijlstra; Andrew G van Kessel; Rainer Mosenthin; Michael G Gänzle
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Review 3.  The intestinal microbiota, gastrointestinal environment and colorectal cancer: a putative role for probiotics in prevention of colorectal cancer?

Authors:  M Andrea Azcárate-Peril; Michael Sikes; José M Bruno-Bárcena
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2011-06-23       Impact factor: 4.052

4.  Dissection of the caffeate respiratory chain in the acetogen Acetobacterium woodii: identification of an Rnf-type NADH dehydrogenase as a potential coupling site.

Authors:  Frank Imkamp; Eva Biegel; Elamparithi Jayamani; Wolfgang Buckel; Volker Müller
Journal:  J Bacteriol       Date:  2007-09-14       Impact factor: 3.490

5.  The genome sequence of the rumen methanogen Methanobrevibacter ruminantium reveals new possibilities for controlling ruminant methane emissions.

Authors:  Sinead C Leahy; William J Kelly; Eric Altermann; Ron S Ronimus; Carl J Yeoman; Diana M Pacheco; Dong Li; Zhanhao Kong; Sharla McTavish; Carrie Sang; Suzanne C Lambie; Peter H Janssen; Debjit Dey; Graeme T Attwood
Journal:  PLoS One       Date:  2010-01-28       Impact factor: 3.240

6.  IcmF is a fusion between the radical B12 enzyme isobutyryl-CoA mutase and its G-protein chaperone.

Authors:  Valentin Cracan; Dominique Padovani; Ruma Banerjee
Journal:  J Biol Chem       Date:  2009-10-28       Impact factor: 5.157

7.  Genomic insights into versatile lifestyle of three new bacterial candidate phyla.

Authors:  Xinxu Zhang; Zongbao Liu; Wei Xu; Jie Pan; Yuhan Huang; Mingwei Cai; Zhuhua Luo; Meng Li
Journal:  Sci China Life Sci       Date:  2022-01-13       Impact factor: 10.372

8.  Electron transport phosphorylation in rumen butyrivibrios: unprecedented ATP yield for glucose fermentation to butyrate.

Authors:  Timothy J Hackmann; Jeffrey L Firkins
Journal:  Front Microbiol       Date:  2015-06-24       Impact factor: 5.640

9.  Evaluation and characterization of bacterial metabolic dynamics with a novel profiling technique, real-time metabolotyping.

Authors:  Shinji Fukuda; Yumiko Nakanishi; Eisuke Chikayama; Hiroshi Ohno; Tsuneo Hino; Jun Kikuchi
Journal:  PLoS One       Date:  2009-03-16       Impact factor: 3.240

10.  Limits to Dihydrogen Incorporation into Electron Sinks Alternative to Methanogenesis in Ruminal Fermentation.

Authors:  Emilio M Ungerfeld
Journal:  Front Microbiol       Date:  2015-11-18       Impact factor: 5.640

  10 in total

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