Literature DB >> 15983865

Horizontal transfer of two operons coding for hydrogenases between bacteria and archaea.

Alexandra Calteau1, Manolo Gouy, Guy Perrière.   

Abstract

Using a phylogenetic approach, we discovered three putative horizontal transfers between bacterial and archaeal species involving large clusters of genes. One transfer involves an operon of 13 genes, called mbx, which probably was transferred into the genome of Thermotoga maritima from a species belonging or close to the Pyrococcus genus. The two others implied an operon of six genes, called ech, transferred independently to the genomes of Thermoanaerobacter tengcongensis and Desulfovibrio gigas, from a species belonging or close to the Methanosarcina genus. All these transfers affected operons coding for multisubunit membrane-bound (NiFe) hydrogenases involved in the energy metabolism of the donor genomes. The functionality of the transferred operons has not been experimentally demonstrated for T. maritima, whereas in D. gigas and T. tengcongensis the encoded multisubunit hydrogenase could have a role in energy conservation. This report adds several cases of horizontal gene transfers among hydrogenases already described.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15983865     DOI: 10.1007/s00239-004-0094-8

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  52 in total

1.  Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis.

Authors:  J Castresana
Journal:  Mol Biol Evol       Date:  2000-04       Impact factor: 16.240

Review 2.  Classification and phylogeny of hydrogenases.

Authors:  P M Vignais; B Billoud; J Meyer
Journal:  FEMS Microbiol Rev       Date:  2001-08       Impact factor: 16.408

3.  Potential genomic determinants of hyperthermophily.

Authors:  Kira S Makarova; Yuri I Wolf; Eugene V Koonin
Journal:  Trends Genet       Date:  2003-04       Impact factor: 11.639

4.  Using CLUSTAL for multiple sequence alignments.

Authors:  D G Higgins; J D Thompson; T J Gibson
Journal:  Methods Enzymol       Date:  1996       Impact factor: 1.600

5.  Modular evolution of the respiratory NADH:ubiquinone oxidoreductase and the origin of its modules.

Authors:  T Friedrich; H Weiss
Journal:  J Theor Biol       Date:  1997-08-21       Impact factor: 2.691

6.  Enzymes of hydrogen metabolism in Pyrococcus furiosus.

Authors:  P J Silva; E C van den Ban; H Wassink; H Haaker; B de Castro; F T Robb; W R Hagen
Journal:  Eur J Biochem       Date:  2000-11

7.  The tryptophanase gene cluster of Haemophilus influenzae type b: evidence for horizontal gene transfer.

Authors:  K Martin; G Morlin; A Smith; A Nordyke; A Eisenstark; M Golomb
Journal:  J Bacteriol       Date:  1998-01       Impact factor: 3.490

8.  Molecular archaeology of the Escherichia coli genome.

Authors:  J G Lawrence; H Ochman
Journal:  Proc Natl Acad Sci U S A       Date:  1998-08-04       Impact factor: 11.205

9.  Codon usages in different gene classes of the Escherichia coli genome.

Authors:  S Karlin; J Mrázek; A M Campbell
Journal:  Mol Microbiol       Date:  1998-09       Impact factor: 3.501

10.  Evolution of mosaic operons by horizontal gene transfer and gene displacement in situ.

Authors:  Marina V Omelchenko; Kira S Makarova; Yuri I Wolf; Igor B Rogozin; Eugene V Koonin
Journal:  Genome Biol       Date:  2003-08-29       Impact factor: 13.583

View more
  13 in total

Review 1.  Electron transfer in syntrophic communities of anaerobic bacteria and archaea.

Authors:  Alfons J M Stams; Caroline M Plugge
Journal:  Nat Rev Microbiol       Date:  2009-08       Impact factor: 60.633

2.  Energy conservation involving 2 respiratory circuits.

Authors:  Marie Charlotte Schoelmerich; Alexander Katsyv; Judith Dönig; Timothy J Hackmann; Volker Müller
Journal:  Proc Natl Acad Sci U S A       Date:  2019-12-26       Impact factor: 11.205

Review 3.  Energy-converting hydrogenases: the link between H2 metabolism and energy conservation.

Authors:  Marie Charlotte Schoelmerich; Volker Müller
Journal:  Cell Mol Life Sci       Date:  2019-10-19       Impact factor: 9.261

4.  Occurrence of hydrogenases in cyanobacteria and anoxygenic photosynthetic bacteria: implications for the phylogenetic origin of cyanobacterial and algal hydrogenases.

Authors:  Marcus Ludwig; Rüdiger Schulz-Friedrich; Jens Appel
Journal:  J Mol Evol       Date:  2006-11-10       Impact factor: 2.395

5.  Impact of substrate glycoside linkage and elemental sulfur on bioenergetics of and hydrogen production by the hyperthermophilic archaeon Pyrococcus furiosus.

Authors:  Chung-Jung Chou; Keith R Shockley; Shannon B Conners; Derrick L Lewis; Donald A Comfort; Michael W W Adams; Robert M Kelly
Journal:  Appl Environ Microbiol       Date:  2007-09-07       Impact factor: 4.792

6.  Identification of the [FeFe]-hydrogenase responsible for hydrogen generation in Thermoanaerobacterium saccharolyticum and demonstration of increased ethanol yield via hydrogenase knockout.

Authors:  A Joe Shaw; David A Hogsett; Lee R Lynd
Journal:  J Bacteriol       Date:  2009-07-31       Impact factor: 3.490

7.  hypD as a marker for [NiFe]-hydrogenases in microbial communities of surface waters.

Authors:  Christian Beimgraben; Kirstin Gutekunst; Friederike Opitz; Jens Appel
Journal:  Appl Environ Microbiol       Date:  2014-04-11       Impact factor: 4.792

8.  Several archaeal homologs of putative oligopeptide-binding proteins encoded by Thermotoga maritima bind sugars.

Authors:  Dhaval M Nanavati; Kamolwan Thirangoon; Kenneth M Noll
Journal:  Appl Environ Microbiol       Date:  2006-02       Impact factor: 4.792

9.  On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales.

Authors:  Olga Zhaxybayeva; Kristen S Swithers; Pascal Lapierre; Gregory P Fournier; Derek M Bickhart; Robert T DeBoy; Karen E Nelson; Camilla L Nesbø; W Ford Doolittle; J Peter Gogarten; Kenneth M Noll
Journal:  Proc Natl Acad Sci U S A       Date:  2009-03-23       Impact factor: 11.205

10.  Metabolic flexibility of sulfate-reducing bacteria.

Authors:  Caroline M Plugge; Weiwen Zhang; Johannes C M Scholten; Alfons J M Stams
Journal:  Front Microbiol       Date:  2011-05-02       Impact factor: 5.640

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.