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Literature DB >> 1598241

The Ribosomal Database Project.

G J Olsen¹, R Overbeek, N Larsen, T L Marsh, M J McCaughey, M A Maciukenas, W M Kuan, T J Macke, Y Xing, C R Woese.

Abstract

The Ribosomal Database Project (RDP) complies ribosomal sequences and related data, and redistributes them in aligned and phylogenetically ordered form to its user community. It also offers various software packages for handling, analyzing and displaying sequences. In addition, the RDP offers (or will offer) certain analytic services. At present the project is in an intermediate stage of development.

Entities: Gene

Keywords: NASA Discipline Exobiology; Non-NASA Center

Mesh：

Substances：

Year: 1992 PMID： 1598241 PMCID： PMC333993 DOI： 10.1093/nar/20.suppl.2199

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

5 in total

1. GenBank.

Authors: C Burks; M Cassidy; M J Cinkosky; K E Cumella; P Gilna; J E Hayden; G M Keen; T A Kelley; M Kelly; D Kristofferson
Journal: Nucleic Acids Res Date: 1991-04-25 Impact factor: 16.971

2. The EMBL data library.

Authors: P J Stoehr; G N Cameron
Journal: Nucleic Acids Res Date: 1991-04-25 Impact factor: 16.971

3. Compilation of small ribosomal subunit RNA sequences.

Authors: J M Neefs; Y Van de Peer; L Hendriks; R De Wachter
Journal: Nucleic Acids Res Date: 1990-04-25 Impact factor: 16.971

4. Interactive analysis of phylogeny and character evolution using the computer program MacClade.

Authors: W P Maddison; D R Maddison
Journal: Folia Primatol (Basel) Date: 1989 Impact factor: 1.246

Review 5. Detailed analysis of the higher-order structure of 16S-like ribosomal ribonucleic acids.

Authors: C R Woese; R Gutell; R Gupta; H F Noller
Journal: Microbiol Rev Date: 1983-12

5 in total

73 in total

1. Laribacter hongkongensis gen. nov., sp. nov., a novel gram-negative bacterium isolated from a cirrhotic patient with bacteremia and empyema.

Authors: K Y Yuen; P C Woo; J L Teng; K W Leung; M K Wong; S K Lau
Journal: J Clin Microbiol Date: 2001-12 Impact factor: 5.948

2. Enrichment culture and microscopy conceal diverse thermophilic Synechococcus populations in a single hot spring microbial mat habitat.

Authors: M J Ferris; A L Ruff-Roberts; E D Kopczynski; M M Bateson; D M Ward
Journal: Appl Environ Microbiol Date: 1996-03 Impact factor: 4.792

3. Comparative genomic analysis in the region of a major Plasmodium-refractoriness locus of Anopheles gambiae.

Authors: Dana Thomasova; Lucas Q Ton; Richard R Copley; Evgeny M Zdobnov; Xuelan Wang; Young S Hong; Cheolho Sim; Peer Bork; Fotis C Kafatos; Frank H Collins
Journal: Proc Natl Acad Sci U S A Date: 2002-06-11 Impact factor: 11.205

4. Identifying constraints on the higher-order structure of RNA: continued development and application of comparative sequence analysis methods.

Authors: R R Gutell; A Power; G Z Hertz; E J Putz; G D Stormo
Journal: Nucleic Acids Res Date: 1992-11-11 Impact factor: 16.971

5. Phylogenetic relationships between the Acantharea and the Polycystinea: a molecular perspective on Haeckel's Radiolaria.

Authors: L A Zettler; M L Sogin; D A Caron
Journal: Proc Natl Acad Sci U S A Date: 1997-10-14 Impact factor: 11.205

Review 6. Placement of attine ant-associated Pseudonocardia in a global Pseudonocardia phylogeny (Pseudonocardiaceae, Actinomycetales): a test of two symbiont-association models.

Authors: Ulrich G Mueller; Heather Ishak; Jung C Lee; Ruchira Sen; Robin R Gutell
Journal: Antonie Van Leeuwenhoek Date: 2010-03-24 Impact factor: 2.271

Review 7. Microarray applications in microbial ecology research.

Authors: T J Gentry; G S Wickham; C W Schadt; Z He; J Zhou
Journal: Microb Ecol Date: 2006-08-08 Impact factor: 4.552

8. Coexistence of bacterial sulfide oxidizers, sulfate reducers, and spirochetes in a gutless worm (Oligochaeta) from the Peru margin.

Authors: Anna Blazejak; Christer Erséus; Rudolf Amann; Nicole Dubilier
Journal: Appl Environ Microbiol Date: 2005-03 Impact factor: 4.792

9. Arcobacter-specific and Arcobacter butzleri-specific 16S rRNA-based DNA probes.

Authors: I V Wesley; L Schroeder-Tucker; A L Baetz; F E Dewhirst; B J Paster
Journal: J Clin Microbiol Date: 1995-07 Impact factor: 5.948

10. Complete oxidation of toluene under strictly anoxic conditions by a new sulfate-reducing bacterium.

Authors: R Rabus; R Nordhaus; W Ludwig; F Widdel
Journal: Appl Environ Microbiol Date: 1993-05 Impact factor: 4.792