Literature DB >> 11724825

Laribacter hongkongensis gen. nov., sp. nov., a novel gram-negative bacterium isolated from a cirrhotic patient with bacteremia and empyema.

K Y Yuen1, P C Woo, J L Teng, K W Leung, M K Wong, S K Lau.   

Abstract

A bacterium was isolated from the blood and empyema of a cirrhotic patient. The cells were facultatively anaerobic, nonsporulating, gram-negative, seagull shaped or spiral rods. The bacterium grows on sheep blood agar as nonhemolytic, gray colonies 1 mm in diameter after 24 h of incubation at 37 degrees C in ambient air. Growth also occurs on MacConkey agar and at 25 and 42 degrees C but not at 4, 44, and 50 degrees C. The bacterium can grow in 1 or 2% but not 3, 4, or 5% NaCl. No enhancement of growth is observed with 5% CO(2). The organism is aflagellated and nonmotile at both 25 and 37 degrees C. It is oxidase, catalase, urease, and arginine dihydrolase positive, and it reduces nitrate. It does not ferment, oxidize, or assimilate any sugar tested. 16S rRNA gene sequencing showed that there are 91 base differences (6.2%), 112 base differences (7.7%), and 116 base differences (8.2%) between the bacterium and Microvirgula aerodenitrificans, Vogesella indigofera, and Chromobacterium species, respectively. The G+C content (mean and standard deviation) is 68.0% +/- 2.43%, and the genomic size is about 3 Mb. Based on phylogenetic affiliation, the bacterium belongs to the Neisseriaceae family of the beta-subclass of Proteobacteria. For these reasons, a new genus and species, Laribacter hongkongensis gen. nov., sp. nov., is proposed, for which HKU1 is the type strain. Further studies should be performed to ascertain the potential of this bacterium to become an emerging pathogen.

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Year:  2001        PMID: 11724825      PMCID: PMC88529          DOI: 10.1128/JCM.39.12.4227-4232.2001

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  16 in total

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Authors:  W K Luk; S S Wong; K Y Yuen; P L Ho; P C Woo; R Lee; J S Peiris; P Y Chau
Journal:  Clin Infect Dis       Date:  1998-03       Impact factor: 9.079

3.  Isolation and characterization of a Salmonella enterica serotype Typhi variant and its clinical and public health implications.

Authors:  P C Woo; A M Fung; S S Wong; H W Tsoi; K Y Yuen
Journal:  J Clin Microbiol       Date:  2001-03       Impact factor: 5.948

4.  Identification by 16S ribosomal RNA gene sequencing of an Enterobacteriaceae species with ambiguous biochemical profile from a renal transplant recipient.

Authors:  P C Woo; E Y Cheung; K Leung; K Yuen
Journal:  Diagn Microbiol Infect Dis       Date:  2001-02       Impact factor: 2.803

5.  Identification of slide coagulase positive, tube coagulase negative Staphylococcus aureus by 16S ribosomal RNA gene sequencing.

Authors:  P C Woo; A S Leung; K W Leung; K Y Yuen
Journal:  Mol Pathol       Date:  2001-08

6.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

Authors:  J D Thompson; D G Higgins; T J Gibson
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7.  Intestinal inflammatory pseudotumour with regional lymph node involvement: identification of a new bacterium as the aetiological agent.

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Journal:  J Pathol       Date:  2000-11       Impact factor: 7.996

Review 8.  Identification of Mycobacterium neoaurum isolated from a neutropenic patient with catheter-related bacteremia by 16S rRNA sequencing.

Authors:  P C Woo; H W Tsoi; K W Leung; P N Lum; A S Leung; C H Ma; K M Kam; K Y Yuen
Journal:  J Clin Microbiol       Date:  2000-09       Impact factor: 5.948

9.  Identification of Arcobacter cryaerophilus isolated from a traffic accident victim with bacteremia by 16S ribosomal RNA gene sequencing.

Authors:  P C Woo; K T Chong; K Leung; T Que; K Yuen
Journal:  Diagn Microbiol Infect Dis       Date:  2001-07       Impact factor: 2.803

10.  Identification by 16S ribosomal RNA gene sequencing of an Enterobacteriaceae species from a bone marrow transplant recipient.

Authors:  P C Woo; P K Leung; K W Leung; K Y Yuen
Journal:  Mol Pathol       Date:  2000-08
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  46 in total

1.  Bacterial identification for publication: when is enough enough?

Authors:  J Michael Janda; Sharon L Abbott
Journal:  J Clin Microbiol       Date:  2002-06       Impact factor: 5.948

2.  Usefulness of the MicroSeq 500 16S ribosomal DNA-based bacterial identification system for identification of clinically significant bacterial isolates with ambiguous biochemical profiles.

Authors:  Patrick C Y Woo; Kenneth H L Ng; Susanna K P Lau; Kam-tong Yip; Ami M Y Fung; Kit-wah Leung; Dorothy M W Tam; Tak-lun Que; Kwok-yung Yuen
Journal:  J Clin Microbiol       Date:  2003-05       Impact factor: 5.948

3.  Ecoepidemiology of Laribacter hongkongensis, a novel bacterium associated with gastroenteritis.

Authors:  Jade L L Teng; Patrick C Y Woo; Shirley S L Ma; Thomas H C Sit; Lip-tet Ng; Wai-ting Hui; Susanna K P Lau; Kwok-yung Yuen
Journal:  J Clin Microbiol       Date:  2005-02       Impact factor: 5.948

4.  Gemella bacteraemia characterised by 16S ribosomal RNA gene sequencing.

Authors:  P C Y Woo; S K P Lau; A M Y Fung; S K Chiu; R W H Yung; K Y Yuen
Journal:  J Clin Pathol       Date:  2003-09       Impact factor: 3.411

Review 5.  Two-dimensional gel electrophoresis in bacterial proteomics.

Authors:  Shirly O T Curreem; Rory M Watt; Susanna K P Lau; Patrick C Y Woo
Journal:  Protein Cell       Date:  2012-05-18       Impact factor: 14.870

6.  Typhoid fever associated with acute appendicitis caused by an H1-j strain of Salmonella enterica serotype Typhi.

Authors:  Susanna K P Lau; Patrick C Y Woo; Clair Y F Chan; Wai-Lan Woo; Gibson K S Woo; Kwok-Yung Yuen
Journal:  J Clin Microbiol       Date:  2005-03       Impact factor: 5.948

7.  Tsukamurella conjunctivitis: a novel clinical syndrome.

Authors:  Patrick C Y Woo; Antonio H Y Ngan; Susanna K P Lau; Kwok-Yung Yuen
Journal:  J Clin Microbiol       Date:  2003-07       Impact factor: 5.948

8.  Analysis of a viridans group strain reveals a case of bacteremia due to lancefield group G alpha-hemolytic Streptococcus dysgalactiae subsp equisimilis in a patient with pyomyositis and reactive arthritis.

Authors:  Patrick C Y Woo; Jade L L Teng; Susanna K P Lau; Peggy N L Lum; Kit-Wah Leung; Kee-Lam Wong; Kin-Wah Li; Kui-Chun Lam; Kwok-Yung Yuen
Journal:  J Clin Microbiol       Date:  2003-02       Impact factor: 5.948

9.  The complete genome and proteome of Laribacter hongkongensis reveal potential mechanisms for adaptations to different temperatures and habitats.

Authors:  Patrick C Y Woo; Susanna K P Lau; Herman Tse; Jade L L Teng; Shirly O T Curreem; Alan K L Tsang; Rachel Y Y Fan; Gilman K M Wong; Yi Huang; Nicholas J Loman; Lori A S Snyder; James J Cai; Jian-Dong Huang; William Mak; Mark J Pallen; Si Lok; Kwok-Yung Yuen
Journal:  PLoS Genet       Date:  2009-03-13       Impact factor: 5.917

10.  Development of a multi-locus sequence typing scheme for Laribacter hongkongensis, a novel bacterium associated with freshwater fish-borne gastroenteritis and traveler's diarrhea.

Authors:  Patrick C Y Woo; Jade L L Teng; Alan K L Tsang; Herman Tse; Vivien Y M Tsang; King-Man Chan; Edwin K Y Lee; Jim K H Chan; Shirley S L Ma; Dorothy M W Tam; Liliane M W Chung; Susanna K P Lau; Kwok-Yung Yuen
Journal:  BMC Microbiol       Date:  2009-01-30       Impact factor: 3.605

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