Literature DB >> 15971074

The mechanism of Mo-/Cu-dependent CO dehydrogenase.

Matthias Hofmann1, Jutta K Kassube, Tobias Graf.   

Abstract

Density functional theory computations at the B3LYP/SDDp//B3LYP/Lanl2DZ level were performed on model complexes derived from [(Me(2)C(2)S(2))Mo(O)(2)-S-CuSMe](2-) or its oxo protonated form to gain insight into the reaction steps involved in substrate oxidation of a Mo-/Cu-dependent CO dehydrogenase. Only the bisoxo but not the hydroxo oxo complex was found to oxidize CO exothermically. A thiocarbamate complex structurally characterized as the reaction product of the enzyme with the inhibitor n-butylisonitrile corresponds to a thermodynamic well on the potential energy surface. For the formation of the analogous thiocarbonate complex from CO oxidation, however, we do not find a significant thermodynamic driving force. In the protein matrix of the enzyme this species should be further destabilized, as it requires the metal centers to move apart considerably from each other.

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Year:  2005        PMID: 15971074     DOI: 10.1007/s00775-005-0661-5

Source DB:  PubMed          Journal:  J Biol Inorg Chem        ISSN: 0949-8257            Impact factor:   3.358


  10 in total

Review 1.  The molybdenum-containing xanthine oxidoreductases and picolinate dehydrogenases.

Authors:  Emil F Pai; Takeshi Nishino
Journal:  Met Ions Biol Syst       Date:  2002

2.  The Mononuclear Molybdenum Enzymes.

Authors:  Russ Hille
Journal:  Chem Rev       Date:  1996-11-07       Impact factor: 60.622

Review 3.  Molybdenum and tungsten in biology.

Authors:  Russ Hille
Journal:  Trends Biochem Sci       Date:  2002-07       Impact factor: 13.807

4.  A novel binuclear [CuSMo] cluster at the active site of carbon monoxide dehydrogenase: characterization by X-ray absorption spectroscopy.

Authors:  Manuel Gnida; Reinhold Ferner; Lothar Gremer; Ortwin Meyer; Wolfram Meyer-Klaucke
Journal:  Biochemistry       Date:  2003-01-14       Impact factor: 3.162

Review 5.  Formation and insertion of the nitrogenase iron-molybdenum cofactor.

Authors:  Patricia C Dos Santos; Dennis R Dean; Yilin Hu; Markus W Ribbe
Journal:  Chem Rev       Date:  2004-02       Impact factor: 60.622

6.  Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1988-01-15

7.  Catalysis at a dinuclear [CuSMo(==O)OH] cluster in a CO dehydrogenase resolved at 1.1-A resolution.

Authors:  Holger Dobbek; Lothar Gremer; Reiner Kiefersauer; Robert Huber; Ortwin Meyer
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-10       Impact factor: 11.205

8.  Quantum chemical modeling of CO oxidation by the active site of molybdenum CO dehydrogenase.

Authors:  Per E M Siegbahn; Alexander F Shestakov
Journal:  J Comput Chem       Date:  2005-07-15       Impact factor: 3.376

9.  Crystal structure and mechanism of CO dehydrogenase, a molybdo iron-sulfur flavoprotein containing S-selanylcysteine.

Authors:  H Dobbek; L Gremer; O Meyer; R Huber
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

10.  Crystal structure of a carbon monoxide dehydrogenase reveals a [Ni-4Fe-5S] cluster.

Authors:  H Dobbek; V Svetlitchnyi; L Gremer; R Huber; O Meyer
Journal:  Science       Date:  2001-08-17       Impact factor: 47.728

  10 in total
  15 in total

Review 1.  Frontiers, opportunities, and challenges in biochemical and chemical catalysis of CO2 fixation.

Authors:  Aaron M Appel; John E Bercaw; Andrew B Bocarsly; Holger Dobbek; Daniel L DuBois; Michel Dupuis; James G Ferry; Etsuko Fujita; Russ Hille; Paul J A Kenis; Cheryl A Kerfeld; Robert H Morris; Charles H F Peden; Archie R Portis; Stephen W Ragsdale; Thomas B Rauchfuss; Joost N H Reek; Lance C Seefeldt; Rudolf K Thauer; Grover L Waldrop
Journal:  Chem Rev       Date:  2013-06-14       Impact factor: 60.622

2.  Kinetic and spectroscopic studies of the molybdenum-copper CO dehydrogenase from Oligotropha carboxidovorans.

Authors:  Bo Zhang; Craig F Hemann; Russ Hille
Journal:  J Biol Chem       Date:  2010-02-23       Impact factor: 5.157

Review 3.  The aerobic CO dehydrogenase from Oligotropha carboxidovorans.

Authors:  Russ Hille; Stephanie Dingwall; Jarett Wilcoxen
Journal:  J Biol Inorg Chem       Date:  2014-08-26       Impact factor: 3.358

Review 4.  The mononuclear molybdenum enzymes.

Authors:  Russ Hille; James Hall; Partha Basu
Journal:  Chem Rev       Date:  2014-01-28       Impact factor: 60.622

Review 5.  Metal centers in the anaerobic microbial metabolism of CO and CO2.

Authors:  Güneş Bender; Elizabeth Pierce; Jeffrey A Hill; Joseph E Darty; Stephen W Ragsdale
Journal:  Metallomics       Date:  2011-06-06       Impact factor: 4.526

Review 6.  Electronic structure contributions to reactivity in xanthine oxidase family enzymes.

Authors:  Benjamin W Stein; Martin L Kirk
Journal:  J Biol Inorg Chem       Date:  2014-11-26       Impact factor: 3.358

7.  n-Butyl isocyanide oxidation at the [NiFe4S4OH(x)] cluster of CO dehydrogenase.

Authors:  Jae-Hun Jeoung; Holger Dobbek
Journal:  J Biol Inorg Chem       Date:  2011-09-09       Impact factor: 3.358

8.  Orbital contributions to CO oxidation in Mo-Cu carbon monoxide dehydrogenase.

Authors:  Benjamin W Stein; Martin L Kirk
Journal:  Chem Commun (Camb)       Date:  2014-02-04       Impact factor: 6.222

9.  (13)C and (63,65)Cu ENDOR studies of CO dehydrogenase from Oligotropha carboxidovorans. Experimental evidence in support of a copper-carbonyl intermediate.

Authors:  Muralidharan Shanmugam; Jarett Wilcoxen; Diana Habel-Rodriguez; George E Cutsail; Martin L Kirk; Brian M Hoffman; Russ Hille
Journal:  J Am Chem Soc       Date:  2013-11-19       Impact factor: 15.419

10.  The hydrogenase activity of the molybdenum/copper-containing carbon monoxide dehydrogenase of Oligotropha carboxidovorans.

Authors:  Jarett Wilcoxen; Russ Hille
Journal:  J Biol Chem       Date:  2013-10-28       Impact factor: 5.157

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