Literature DB >> 15955922

High-throughput RNA isolation technologies. New tools for high-resolution gene expression profiling in plant systems.

Ji-Young Lee1, Mitchell Levesque, Philip N Benfey.   

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Year:  2005        PMID： 15955922      PMCID： PMC1150379          DOI： 10.1104/pp.105.061812

Source DB:  PubMed          Journal:  Plant Physiol        ISSN： 0032-0889            Impact factor:   8.340


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  34 in total

1.  High-fidelity mRNA amplification for gene profiling.

Authors:  E Wang; L D Miller; G A Ohnmacht; E T Liu; F M Marincola
Journal:  Nat Biotechnol       Date:  2000-04       Impact factor: 54.908

2.  A gene expression map of the Arabidopsis root.

Authors:  Kenneth Birnbaum; Dennis E Shasha; Jean Y Wang; Jee W Jung; Georgina M Lambert; David W Galbraith; Philip N Benfey
Journal:  Science       Date:  2003-12-12       Impact factor: 47.728

3.  A high-resolution transcript profile across the wood-forming meristem of poplar identifies potential regulators of cambial stem cell identity.

Authors:  Jarmo Schrader; Jeanette Nilsson; Ewa Mellerowicz; Anders Berglund; Peter Nilsson; Magnus Hertzberg; Göran Sandberg
Journal:  Plant Cell       Date:  2004-08-17       Impact factor: 11.277

Review 4.  Networks of transcription factors with roles in environmental stress response.

Authors:  Wenqiong J Chen; Tong Zhu
Journal:  Trends Plant Sci       Date:  2004-12       Impact factor: 18.313

Review 5.  Consistent over-estimation of gene number in complex plant genomes.

Authors:  Jeffrey L Bennetzen; Craig Coleman; Renyi Liu; Jianxin Ma; Wusirika Ramakrishna
Journal:  Curr Opin Plant Biol       Date:  2004-12       Impact factor: 7.834

6.  Amplified RNA synthesized from limited quantities of heterogeneous cDNA.

Authors:  R N Van Gelder; M E von Zastrow; A Yool; W C Dement; J D Barchas; J H Eberwine
Journal:  Proc Natl Acad Sci U S A       Date:  1990-03       Impact factor: 11.205

7.  Laser capture microdissection.

Authors:  M R Emmert-Buck; R F Bonner; P D Smith; R F Chuaqui; Z Zhuang; S R Goldstein; R A Weiss; L A Liotta
Journal:  Science       Date:  1996-11-08       Impact factor: 47.728

8.  In situ isolation of mRNA from individual plant cells: creation of cell-specific cDNA libraries.

Authors:  E E Karrer; J E Lincoln; S Hogenhout; A B Bennett; R M Bostock; B Martineau; W J Lucas; D G Gilchrist; D Alexander
Journal:  Proc Natl Acad Sci U S A       Date:  1995-04-25       Impact factor: 11.205

9.  Analysis of the genome sequence of the flowering plant Arabidopsis thaliana.

Authors: 
Journal:  Nature       Date:  2000-12-14       Impact factor: 49.962

10.  Transcriptional profile of the Arabidopsis root quiescent center.

Authors:  Tal Nawy; Ji-Young Lee; Juliette Colinas; Jean Y Wang; Sumena C Thongrod; Jocelyn E Malamy; Kenneth Birnbaum; Philip N Benfey
Journal:  Plant Cell       Date:  2005-06-03       Impact factor: 11.277
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  7 in total

Review 1.  Unraveling the dynamic transcriptome.

Authors:  Siobhan M Brady; Terri A Long; Philip N Benfey
Journal:  Plant Cell       Date:  2006-09       Impact factor: 11.277

2.  Global functional analyses of rice promoters by genomics approaches.

Authors:  Su-May Yu; Swee-Suak Ko; Chwan-Yang Hong; Hsou-Jan Sun; Yue-Ie Hsing; Chii-Gong Tong; Tuan-Hua David Ho
Journal:  Plant Mol Biol       Date:  2007-10-09       Impact factor: 4.076

Review 3.  Circadian control of global gene expression patterns.

Authors:  Colleen J Doherty; Steve A Kay
Journal:  Annu Rev Genet       Date:  2010       Impact factor: 16.830

4.  Arabidopsis ABA INSENSITIVE4 regulates lipid mobilization in the embryo and reveals repression of seed germination by the endosperm.

Authors:  Steven Penfield; Yi Li; Alison D Gilday; Stuart Graham; Ian A Graham
Journal:  Plant Cell       Date:  2006-07-14       Impact factor: 11.277

5.  Unique and overlapping expression patterns among members of photosynthesis-associated nuclear gene families in Arabidopsis.

Authors:  Megan G Sawchuk; Tyler J Donner; Philip Head; Enrico Scarpella
Journal:  Plant Physiol       Date:  2008-09-26       Impact factor: 8.340

6.  Statistical evaluation of transcriptomic data generated using the Affymetrix one-cycle, two-cycle and IVT-Express RNA labelling protocols with the Arabidopsis ATH1 microarray.

Authors:  Tara J Holman; Michael H Wilson; Kim Kenobi; Ian L Dryden; T Charlie Hodgman; Andrew Ta Wood; Michael J Holdsworth
Journal:  Plant Methods       Date:  2010-03-15       Impact factor: 4.993

7.  A quantitative RT-PCR platform for high-throughput expression profiling of 2500 rice transcription factors.

Authors:  Camila Caldana; Wolf-Rüdiger Scheible; Bernd Mueller-Roeber; Slobodan Ruzicic
Journal:  Plant Methods       Date:  2007-06-08       Impact factor: 4.993
  7 in total

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