Literature DB >> 15951113

Linear and non-linear pressure dependence of enzyme catalytic parameters.

Patrick Masson1, Claude Balny.   

Abstract

The pressure dependence of enzyme catalytic parameters allows volume changes associated with substrate binding and activation volumes for the chemical steps to be determined. Because catalytic constants are composite parameters, elementary volume change contributions can be calculated from the pressure differentiation of kinetic constants. Linear and non-linear pressure-dependence of single-step enzyme reactions and steady-state catalytic parameters can be observed. Non-linearity can be interpreted either in terms of interdependence between the pressure and other environmental parameters (i.e., temperature, solvent composition, pH), pressure-induced enzyme unfolding, compressibility changes and pressure-induced rate limiting changes. These different situations are illustrated with several examples.

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Year:  2005        PMID: 15951113     DOI: 10.1016/j.bbagen.2005.05.003

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  8 in total

1.  Hydrostatic and osmotic pressure study of the RNA hydration.

Authors:  Małgorzata Giel-Pietraszuk; Jan Barciszewski
Journal:  Mol Biol Rep       Date:  2012-05       Impact factor: 2.316

2.  Analytical ultracentrifugation sedimentation velocity for the characterization of detergent-solubilized membrane proteins Ca++-ATPase and ExbB.

Authors:  Andrés G Salvay; Monica Santamaria; Marc le Maire; Christine Ebel
Journal:  J Biol Phys       Date:  2008-04-25       Impact factor: 1.365

3.  Temperature- and pressure-dependent stopped-flow kinetic studies of jack bean urease. Implications for the catalytic mechanism.

Authors:  Barbara Krajewska; Rudi van Eldik; Małgorzata Brindell
Journal:  J Biol Inorg Chem       Date:  2012-08-14       Impact factor: 3.358

4.  CYP261 enzymes from deep sea bacteria: a clue to conformational heterogeneity in cytochromes P450.

Authors:  Dmitri R Davydov; Elena V Sineva; Nadezhda Y Davydova; Douglas H Bartlett; James R Halpert
Journal:  Biotechnol Appl Biochem       Date:  2013-01-25       Impact factor: 2.431

5.  Pressure and Temperature Effects on the Activity and Structure of the Catalytic Domain of Human MT1-MMP.

Authors:  Elena Decaneto; Saba Suladze; Christopher Rosin; Martina Havenith; Wolfgang Lubitz; Roland Winter
Journal:  Biophys J       Date:  2015-12-01       Impact factor: 4.033

Review 6.  Does the pressure dependence of kinetic isotope effects report usefully on dynamics in enzyme H-transfer reactions?

Authors:  Robin Hoeven; Derren J Heyes; Sam Hay; Nigel S Scrutton
Journal:  FEBS J       Date:  2015-01-29       Impact factor: 5.542

7.  Pressure tolerance of deep-sea enzymes can be evolved through increasing volume changes in protein transitions: a study with lactate dehydrogenases from abyssal and hadal fishes.

Authors:  Mackenzie E Gerringer; Paul H Yancey; Olga V Tikhonova; Nikita E Vavilov; Victor G Zgoda; Dmitri R Davydov
Journal:  FEBS J       Date:  2020-04-21       Impact factor: 5.542

8.  Probing the Transition State in Enzyme Catalysis by High-Pressure NMR Dynamics.

Authors:  John B Stiller; S Jordan Kerns; Marc Hoemberger; Young-Jin Cho; Renee Otten; Michael F Hagan; Dorothee Kern
Journal:  Nat Catal       Date:  2019-06-24
  8 in total

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