Literature DB >> 15950477

Eukaryotic transcription factors as direct nutrient sensors.

Christopher A Sellick1, Richard J Reece.   

Abstract

The recognition of changes in environmental conditions, and the ability to adapt to these changes, is essential for the viability of cells. There are numerous well-characterized systems by which the presence or absence of an individual metabolite can be recognized by a cell. The recognition of a metabolite is, however, just one step of a process that often results in changes in the expression of sets of genes required to respond to that metabolite. The signalling pathway between metabolite recognition and transcriptional control is often complex. However, recent evidence from yeast suggests that complex signalling pathways might be circumvented via the direct interaction between individual metabolites and regulators of RNA polymerase II transcription.

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Year:  2005        PMID: 15950477     DOI: 10.1016/j.tibs.2005.05.007

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  38 in total

1.  Yeast zinc cluster proteins Dal81 and Uga3 cooperate by targeting common coactivators for transcriptional activation of γ-aminobutyrate responsive genes.

Authors:  Marc-André Sylvain; Xiao Bei Liang; Karen Hellauer; Bernard Turcotte
Journal:  Genetics       Date:  2011-04-21       Impact factor: 4.562

2.  Regulation of an intergenic transcript controls adjacent gene transcription in Saccharomyces cerevisiae.

Authors:  Joseph A Martens; Pei-Yun Jenny Wu; Fred Winston
Journal:  Genes Dev       Date:  2005-11-15       Impact factor: 11.361

3.  Binding characteristics and regulatory mechanisms of the transcription factors controlling oleate-responsive genes in Saccharomyces cerevisiae.

Authors:  Igor V Karpichev; Jorge M Durand-Heredia; Yi Luo; Gillian M Small
Journal:  J Biol Chem       Date:  2008-02-19       Impact factor: 5.157

4.  The interaction between an acidic transcriptional activator and its inhibitor. The molecular basis of Gal4p recognition by Gal80p.

Authors:  James B Thoden; Louise A Ryan; Richard J Reece; Hazel M Holden
Journal:  J Biol Chem       Date:  2008-08-13       Impact factor: 5.157

5.  Functioning of a metabolic flux sensor in Escherichia coli.

Authors:  Karl Kochanowski; Benjamin Volkmer; Luca Gerosa; Bart R Haverkorn van Rijsewijk; Alexander Schmidt; Matthias Heinemann
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-31       Impact factor: 11.205

6.  Regulatory genes controlling fatty acid catabolism and peroxisomal functions in the filamentous fungus Aspergillus nidulans.

Authors:  Michael J Hynes; Sandra L Murray; Anna Duncan; Gillian S Khew; Meryl A Davis
Journal:  Eukaryot Cell       Date:  2006-05

Review 7.  Coordination of microbial metabolism.

Authors:  Victor Chubukov; Luca Gerosa; Karl Kochanowski; Uwe Sauer
Journal:  Nat Rev Microbiol       Date:  2014-03-24       Impact factor: 60.633

8.  Localization and interaction of the proteins constituting the GAL genetic switch in Saccharomyces cerevisiae.

Authors:  Raymond Wightman; Rachel Bell; Richard J Reece
Journal:  Eukaryot Cell       Date:  2008-10-24

Review 9.  Regulations of sugar transporters: insights from yeast.

Authors:  J Horák
Journal:  Curr Genet       Date:  2013-03-01       Impact factor: 3.886

10.  Transcriptomic analysis of the role of carboxylic acids in metabolite signaling in Arabidopsis leaves.

Authors:  Iris Finkemeier; Ann-Christine König; William Heard; Adriano Nunes-Nesi; Phuong Anh Pham; Dario Leister; Alisdair R Fernie; Lee J Sweetlove
Journal:  Plant Physiol       Date:  2013-03-13       Impact factor: 8.340

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