Literature DB >> 15940271

Intron polymorphism (EPIC-PCR) reveals phylogeographic structure of Zacco platypus in China: a possible target for aquaculture development.

P Berrebi1, E Boissin, F Fang, G Cattaneo-Berrebi.   

Abstract

The present study aims at a phylogeographic description of Zacco platypus from southeast China, in order to detect subdivisions within the nominal species. Two main basins were sampled: the Chang Jiang (Yangstze River) in central and east China (Hunan and Sichuan provinces) and the Xi Jiang, the more southern main tributary of the Zhu Jiang (Pearl River, Guangxi province). A total of 27 intron systems were tested, five of them were informative and gave 12 interpretable and polymorphic loci. Within the diversity of Z. platypus, four genetic groups were identified by multidimensional (FCA) analyses, corresponding to distinct genetic pools. The geographical distribution of the genetic groups corresponds neither with the drainage structure, nor the geographic distances between samples. It follows that isolation by distance and limited migration are insufficient to explain this geographic structure. The history of the river network therefore appears to have played an important role.

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Year:  2005        PMID: 15940271     DOI: 10.1038/sj.hdy.6800660

Source DB:  PubMed          Journal:  Heredity (Edinb)        ISSN: 0018-067X            Impact factor:   3.821


  5 in total

1.  Genome-wide identification of intron fragment insertion mutations and their potential use as SCAR molecular markers in the soybean.

Authors:  Yongjun Shu; Yong Li; Yanming Zhu; Zhenlei Zhu; Dekang Lv; Xi Bai; Hua Cai; Wei Ji; Dianjing Guo
Journal:  Theor Appl Genet       Date:  2010-02-17       Impact factor: 5.699

2.  Exon-primed intron-crossing (EPIC) markers for non-model teleost fishes.

Authors:  Chenhong Li; Jean-Jack M Riethoven; Lingbo Ma
Journal:  BMC Evol Biol       Date:  2010-03-31       Impact factor: 3.260

3.  Huangshan population of Chinese Zacco platypus (Teleostei, Cyprinidae) harbors diverse matrilines and high genetic diversity.

Authors:  Xin Zheng; Tian-Qi Zhou; Tao Wan; Anabel Perdices; Jin-Quan Yang; Xin-Sheng Tang; Zheng-Ping Wang; Li-Qun Huang; Song Huang; Shun-Ping He
Journal:  Dongwuxue Yanjiu       Date:  2016-03-18

4.  Identification of novel single nucleotide polymorphisms in the DGAT1 gene of buffaloes by PCR-SSCP.

Authors:  Ashwin A Raut; Anil Kumar; Sheo N Kala; Vinod Chhokar; Neeraj Rana; Vikas Beniwal; Sundeep Jaglan; Sachin K Samuchiwal; Jitender K Singh; Anamika Mishra
Journal:  Genet Mol Biol       Date:  2012-07-13       Impact factor: 1.771

5.  Transcriptional Responses of Stress-Related Genes in Pale Chub (Zacco platypus) Inhabiting Different Aquatic Environments: Application for Biomonitoring Aquatic Ecosystems.

Authors:  Won-Seok Kim; Kiyun Park; Jae-Won Park; Sun-Ho Lee; Ji-Hoon Kim; Yong-Jun Kim; Gun-Hee Oh; Bong-Soon Ko; Ji-Won Park; Cheol Hong; Tae-Sik Yu; Ihn-Sil Kwak
Journal:  Int J Environ Res Public Health       Date:  2022-09-12       Impact factor: 4.614

  5 in total

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