Literature DB >> 15939348

Microbial starch-binding domain.

Romina Rodríguez-Sanoja1, Norma Oviedo, Sergio Sánchez.   

Abstract

Glucosidic bonds from different non-soluble polysaccharides such as starch, cellulose and xylan are hydrolyzed by amylases, cellulases and xylanases, respectively. These enzymes are produced by microorganisms. They have a modular structure that is composed of a catalytic domain and at least one non-catalytic domain that is involved in polysaccharide binding. Starch-binding modules are present in microbial enzymes that are involved in starch metabolism; these are classified into several different families on the basis of their amino acid sequence similarities. Such binding domains promote attachment to the substrate and increase its concentration at the active site of the enzyme, which allows microorganisms to degrade non-soluble starch. Fold similarities are better conserved than sequences; nevertheless, it is possible to notice two evolutionary clusters of microbial starch-binding domains. These domains have enormous potential as tags for protein immobilization, as well as for the tailoring of enzymes that play a part in polysaccharide metabolism.

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Year:  2005        PMID: 15939348     DOI: 10.1016/j.mib.2005.04.013

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  26 in total

1.  Effect of C-terminal truncation on enzyme properties of recombinant amylopullulanase from Thermoanaerobacter pseudoethanolicus.

Authors:  Fu-Pang Lin; Yi-Hsuan Ho; Hsu-Yang Lin; Hui-Ju Lin
Journal:  Extremophiles       Date:  2012-03-06       Impact factor: 2.395

2.  Alpha-amylase starch binding domains: cooperative effects of binding to starch granules of multiple tandemly arranged domains.

Authors:  D Guillén; M Santiago; L Linares; R Pérez; J Morlon; B Ruiz; S Sánchez; R Rodríguez-Sanoja
Journal:  Appl Environ Microbiol       Date:  2007-04-27       Impact factor: 4.792

3.  Biochemical characterization of engineered amylopullulanase from Thermoanaerobacter ethanolicus 39E-implicating the non-necessity of its 100 C-terminal amino acid residues.

Authors:  Hsu-Yang Lin; Hsu-Han Chuang; Fu-Pang Lin
Journal:  Extremophiles       Date:  2008-05-24       Impact factor: 2.395

4.  Purification, characterization and cloning of a thermotolerant isoamylase produced from Bacillus sp. CICIM 304.

Authors:  Youran Li; Dandan Niu; Liang Zhang; Zhengxiang Wang; Guiyang Shi
Journal:  J Ind Microbiol Biotechnol       Date:  2013-03-15       Impact factor: 3.346

Review 5.  α-Amylase: an enzyme specificity found in various families of glycoside hydrolases.

Authors:  Štefan Janeček; Birte Svensson; E Ann MacGregor
Journal:  Cell Mol Life Sci       Date:  2013-06-27       Impact factor: 9.261

6.  The family 21 carbohydrate-binding module of glucoamylase from Rhizopus oryzae consists of two sites playing distinct roles in ligand binding.

Authors:  Wei-I Chou; Tun-Wen Pai; Shi-Hwei Liu; Bor-Kai Hsiung; Margaret D-T Chang
Journal:  Biochem J       Date:  2006-06-15       Impact factor: 3.857

Review 7.  Carbohydrate binding modules: biochemical properties and novel applications.

Authors:  Oded Shoseyov; Ziv Shani; Ilan Levy
Journal:  Microbiol Mol Biol Rev       Date:  2006-06       Impact factor: 11.056

8.  A single residue mutation abolishes attachment of the CBM26 starch-binding domain from Lactobacillus amylovorus alpha-amylase.

Authors:  Romina Rodríguez-Sanoja; N Oviedo; L Escalante; B Ruiz; S Sánchez
Journal:  J Ind Microbiol Biotechnol       Date:  2008-12-04       Impact factor: 3.346

9.  The unique evolution of the carbohydrate-binding module CBM20 in laforin.

Authors:  Andrea Kuchtová; Matthew S Gentry; Štefan Janeček
Journal:  FEBS Lett       Date:  2018-02-15       Impact factor: 4.124

10.  Conservation of the glucan phosphatase laforin is linked to rates of molecular evolution and the glucan metabolism of the organism.

Authors:  Matthew S Gentry; Rachel M Pace
Journal:  BMC Evol Biol       Date:  2009-06-22       Impact factor: 3.260

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