Literature DB >> 15935503

DNA microarray analysis of the nitrogen starvation response of Corynebacterium glutamicum.

Maike Silberbach1, Andrea Hüser, Jörn Kalinowski, Alfred Pühler, Britta Walter, Reinhard Krämer, Andreas Burkovski.   

Abstract

Nitrogen is an essential component of nearly all of the complex macromolecules in a bacterial cell, e.g. proteins, nucleic acids, and cell wall components. Accordingly, most prokaryotes have developed elaborate control mechanisms to provide an optimal supply of nitrogen for cellular metabolism and to cope with situations of nitrogen limitation. In this communication, a global analysis of the Corynebacterium glutamicum nitrogen starvation response by transcriptional profiling using DNA microarrays is presented. Our results show that C. glutamicum reacts to nitrogen starvation with a rearrangement of the cellular transport capacity, changes in metabolic pathways concerning nitrogen assimilation and amino acid biosynthesis, and a decreased capacity for protein synthesis.

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Year:  2005        PMID: 15935503     DOI: 10.1016/j.jbiotec.2005.04.007

Source DB:  PubMed          Journal:  J Biotechnol        ISSN: 0168-1656            Impact factor:   3.307


  9 in total

1.  Global transcriptional analysis of Methanosarcina mazei strain Gö1 under different nitrogen availabilities.

Authors:  Katharina Veit; Claudia Ehlers; Armin Ehrenreich; Kirsty Salmon; Raymond Hovey; Robert P Gunsalus; Uwe Deppenmeier; Ruth A Schmitz
Journal:  Mol Genet Genomics       Date:  2006-04-20       Impact factor: 3.291

2.  Dual transcriptional profiling of a bacterial/fungal confrontation: Collimonas fungivorans versus Aspergillus niger.

Authors:  Francesca Mela; Kathrin Fritsche; Wietse de Boer; Johannes A van Veen; Leo H de Graaff; Marlies van den Berg; Johan H J Leveau
Journal:  ISME J       Date:  2011-05-26       Impact factor: 10.302

3.  Global gene expression under nitrogen starvation in Xylella fastidiosa: contribution of the σ54 regulon.

Authors:  José F da Silva Neto; Tie Koide; Suely L Gomes; Marilis V Marques
Journal:  BMC Microbiol       Date:  2010-08-28       Impact factor: 3.605

4.  Global gene expression during stringent response in Corynebacterium glutamicum in presence and absence of the rel gene encoding (p)ppGpp synthase.

Authors:  Olaf Brockmann-Gretza; Jörn Kalinowski
Journal:  BMC Genomics       Date:  2006-09-08       Impact factor: 3.969

5.  Defining the nitrogen regulated transcriptome of Mycobacterium smegmatis using continuous culture.

Authors:  Michael Petridis; Andrej Benjak; Gregory M Cook
Journal:  BMC Genomics       Date:  2015-10-19       Impact factor: 3.969

6.  Transcriptome landscape of Synechococcus elongatus PCC 7942 for nitrogen starvation responses using RNA-seq.

Authors:  Sun Young Choi; Byeonghyeok Park; In-Geol Choi; Sang Jun Sim; Sun-Mi Lee; Youngsoon Um; Han Min Woo
Journal:  Sci Rep       Date:  2016-08-04       Impact factor: 4.379

7.  DNA binding by Corynebacterium glutamicum TetR-type transcription regulator AmtR.

Authors:  Daniela Muhl; Nadja Jessberger; Kristin Hasselt; Christophe Jardin; Heinrich Sticht; Andreas Burkovski
Journal:  BMC Mol Biol       Date:  2009-07-23       Impact factor: 2.946

8.  Comparative metagenomic and metatranscriptomic analysis of hindgut paunch microbiota in wood- and dung-feeding higher termites.

Authors:  Shaomei He; Natalia Ivanova; Edward Kirton; Martin Allgaier; Claudia Bergin; Rudolf H Scheffrahn; Nikos C Kyrpides; Falk Warnecke; Susannah G Tringe; Philip Hugenholtz
Journal:  PLoS One       Date:  2013-04-12       Impact factor: 3.240

9.  Nitrogen starvation-induced transcriptome alterations and influence of transcription regulator mutants in Mycobacterium smegmatis.

Authors:  Nadja Jeßberger; Yinhua Lu; Johannes Amon; Fritz Titgemeyer; Sophia Sonnewald; Stephen Reid; Andreas Burkovski
Journal:  BMC Res Notes       Date:  2013-11-22
  9 in total

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