Literature DB >> 15925550

Repair of UV lesions in nucleosomes--intrinsic properties and remodeling.

Fritz Thoma1.   

Abstract

Nucleotide excision repair and reversal of pyrimidine dimers by photolyase (photoreactivation) are two major pathways to remove UV-lesions from DNA. Here, it is discussed how lesions are recognized and removed when the DNA is condensed into nucleosomes. During the recent years it was shown that nucleosomes inhibit photolyase and excision repair in vitro and slow down repair in vivo. The correlation of DNA-repair rates with nucleosome positions in yeast suggests that intrinsic properties of nucleosomes such as mobility and transient unwrapping of nucleosomal DNA facilitate damage recognition. Moreover, it was shown that nucleosome remodeling activities can act on UV-damaged DNA in vitro and facilitate repair suggesting that random remodeling of chromatin might contribute to damage recognition in vivo. Recent work on nucleosome structure and mobility is included to evaluate how nucleosomes accommodate DNA lesions and how nucleosome mobility and remodeling can take place on damaged DNA.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15925550     DOI: 10.1016/j.dnarep.2005.04.005

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  30 in total

1.  Rotational position of a 5-methylcytosine-containing cyclobutane pyrimidine dimer in a nucleosome greatly affects its deamination rate.

Authors:  Qian Song; Vincent J Cannistraro; John-Stephen Taylor
Journal:  J Biol Chem       Date:  2010-12-15       Impact factor: 5.157

Review 2.  The role of chromatin proteins in DNA damage recognition and repair.

Authors:  Piotr Widlak; Monika Pietrowska; Joanna Lanuszewska
Journal:  Histochem Cell Biol       Date:  2006-01       Impact factor: 4.304

3.  Rapid accessibility of nucleosomal DNA in yeast on a second time scale.

Authors:  Andrea Bucceri; Kristin Kapitza; Fritz Thoma
Journal:  EMBO J       Date:  2006-06-15       Impact factor: 11.598

4.  ATP-dependent chromatin remodeling is required for base excision repair in conventional but not in variant H2A.Bbd nucleosomes.

Authors:  Hervé Menoni; Didier Gasparutto; Ali Hamiche; Jean Cadet; Stefan Dimitrov; Philippe Bouvet; Dimitar Angelov
Journal:  Mol Cell Biol       Date:  2007-06-25       Impact factor: 4.272

5.  UV sensitive mutations in histone H3 in Saccharomyces cerevisiae that alter specific K79 methylation states genetically act through distinct DNA repair pathways.

Authors:  Margery L Evans; Lindsey J Bostelman; Ashley M Albrecht; Andrew M Keller; Natasha T Strande; Jeffrey S Thompson
Journal:  Curr Genet       Date:  2008-03-08       Impact factor: 3.886

Review 6.  Determinants and dynamics of genome accessibility.

Authors:  Oliver Bell; Vijay K Tiwari; Nicolas H Thomä; Dirk Schübeler
Journal:  Nat Rev Genet       Date:  2011-07-12       Impact factor: 53.242

7.  DNA stretching in the nucleosome facilitates alkylation by an intercalating antitumour agent.

Authors:  Gabriela E Davey; Bin Wu; Yuancai Dong; Uttam Surana; Curt A Davey
Journal:  Nucleic Acids Res       Date:  2009-12-21       Impact factor: 16.971

8.  Clustered and genome-wide transient mutagenesis in human cancers: Hypermutation without permanent mutators or loss of fitness.

Authors:  Steven A Roberts; Dmitry A Gordenin
Journal:  Bioessays       Date:  2014-02-26       Impact factor: 4.345

9.  Chromatin imaging with time-lapse atomic force microscopy.

Authors:  Yuri L Lyubchenko; Luda S Shlyakhtenko
Journal:  Methods Mol Biol       Date:  2015

10.  Dynamics of nucleosomes revealed by time-lapse atomic force microscopy.

Authors:  Luda S Shlyakhtenko; Alexander Y Lushnikov; Yuri L Lyubchenko
Journal:  Biochemistry       Date:  2009-08-25       Impact factor: 3.162

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.