Literature DB >> 15923720

Biomedical informatics research network: building a national collaboratory to hasten the derivation of new understanding and treatment of disease.

Jeffrey S Grethe1, Chaitan Baru, Amarnath Gupta, Mark James, Bertram Ludaescher, Maryann E Martone, Philip M Papadopoulos, Steven T Peltier, Arcot Rajasekar, Simone Santini, Ilya N Zaslavsky, Mark H Ellisman.   

Abstract

Through support from the National Institutes of Health's National Center for Research Resources, the Biomedical Informatics Research Network (BIRN) is pioneering the use of advanced cyberinfrastructure for medical research. By synchronizing developments in advanced wide area networking, distributed computing, distributed database federation, and other emerging capabilities of e-science, the BIRN has created a collaborative environment that is paving the way for biomedical research and clinical information management. The BIRN Coordinating Center (BIRN-CC) is orchestrating the development and deployment of key infrastructure components for immediate and long-range support of biomedical and clinical research being pursued by domain scientists in three neuroimaging test beds.

Mesh:

Year:  2005        PMID: 15923720

Source DB:  PubMed          Journal:  Stud Health Technol Inform        ISSN: 0926-9630


  27 in total

1.  Bio-image warehouse system: concept and implementation of a diagnosis-based data warehouse for advanced imaging modalities in neuroradiology.

Authors:  L Minati; F Ghielmetti; V Ciobanu; L D'Incerti; C Maccagnano; A Bizzi; M G Bruzzone
Journal:  J Digit Imaging       Date:  2007-03       Impact factor: 4.056

2.  The cell centered database project: an update on building community resources for managing and sharing 3D imaging data.

Authors:  Maryann E Martone; Joshua Tran; Willy W Wong; Joy Sargis; Lisa Fong; Stephen Larson; Stephan P Lamont; Amarnath Gupta; Mark H Ellisman
Journal:  J Struct Biol       Date:  2007-10-16       Impact factor: 2.867

3.  caGrid 1.0: an enterprise Grid infrastructure for biomedical research.

Authors:  Scott Oster; Stephen Langella; Shannon Hastings; David Ervin; Ravi Madduri; Joshua Phillips; Tahsin Kurc; Frank Siebenlist; Peter Covitz; Krishnakant Shanbhag; Ian Foster; Joel Saltz
Journal:  J Am Med Inform Assoc       Date:  2007-12-20       Impact factor: 4.497

Review 4.  VirtualPACS--a federating gateway to access remote image data resources over the grid.

Authors:  Ashish Sharma; Tony Pan; B Barla Cambazoglu; Metin Gurcan; Tahsin Kurc; Joel Saltz
Journal:  J Digit Imaging       Date:  2007-09-18       Impact factor: 4.056

5.  Is it time to re-prioritize neuroimaging databases and digital repositories?

Authors:  John Darrell Van Horn; Arthur W Toga
Journal:  Neuroimage       Date:  2009-04-14       Impact factor: 6.556

6.  Data governance requirements for distributed clinical research networks: triangulating perspectives of diverse stakeholders.

Authors:  Katherine K Kim; Dennis K Browe; Holly C Logan; Roberta Holm; Lori Hack; Lucila Ohno-Machado
Journal:  J Am Med Inform Assoc       Date:  2013-12-03       Impact factor: 4.497

7.  The collaboratory for MS3D: a new cyberinfrastructure for the structural elucidation of biological macromolecules and their assemblies using mass spectrometry-based approaches.

Authors:  Eizadora T Yu; Arie Hawkins; Irwin D Kuntz; Larry A Rahn; Andrew Rothfuss; Kenneth Sale; Malin M Young; Christine L Yang; Carmen M Pancerella; Daniele Fabris
Journal:  J Proteome Res       Date:  2008-09-26       Impact factor: 4.466

8.  e-Science, caGrid, and Translational Biomedical Research.

Authors:  Joel Saltz; Tahsin Kurc; Shannon Hastings; Stephen Langella; Scott Oster; David Ervin; Ashish Sharma; Tony Pan; Metin Gurcan; Justin Permar; Renato Ferreira; Philip Payne; Umit Catalyurek; Enrico Caserta; Gustavo Leone; Michael C Ostrowski; Ravi Madduri; Ian Foster; Subhashree Madhavan; Kenneth H Buetow; Krishnakant Shanbhag; Eliot Siegel
Journal:  Computer (Long Beach Calif)       Date:  2008-11       Impact factor: 2.683

9.  Interactive exploration of neuroanatomical meta-spaces.

Authors:  Shantanu H Joshi; John Darrell Van Horn; Arthur W Toga
Journal:  Front Neuroinform       Date:  2009-11-06       Impact factor: 4.081

10.  Derived Data Storage and Exchange Workflow for Large-Scale Neuroimaging Analyses on the BIRN Grid.

Authors:  David B Keator; Dingying Wei; Syam Gadde; Jeremy Bockholt; Jeffrey S Grethe; Daniel Marcus; Nicole Aucoin; Ibrahim B Ozyurt
Journal:  Front Neuroinform       Date:  2009-09-07       Impact factor: 4.081

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