Literature DB >> 15919197

Drugs targeting the ribosome.

Thomas Hermann1.   

Abstract

Several classes of clinically important antibiotics target the bacterial ribosome, where they interfere with microbial protein synthesis. Structural studies of the interaction of antibiotics with the ribosome have revealed that these small molecules recognize predominantly the rRNA components. Over the past two years, three-dimensional structures of ribosome-antibiotic complexes have been determined, providing a detailed picture of the binding sites and mechanism of action of antibacterials, including 'blockbuster' drugs such as the macrolides. Structure-based approaches have come to fruition that comprise the design and crystal structure analysis of novel semi-synthetic antibiotics that target the ribosome decoding site.

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Year:  2005        PMID: 15919197     DOI: 10.1016/j.sbi.2005.05.001

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  58 in total

1.  Cloning, purification, crystallization and preliminary X-ray analysis of the Burkholderia pseudomallei L1 ribosomal protein.

Authors:  Abd Ghani Abd Aziz; Sergey N Ruzheinikov; Svetlana E Sedelnikova; Rahmah Mohamed; Sheila Nathan; Patrick J Baker; David W Rice
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-02-22

2.  A peptide nucleic acid-aminosugar conjugate targeting transactivation response element of HIV-1 RNA genome shows a high bioavailability in human cells and strongly inhibits tat-mediated transactivation of HIV-1 transcription.

Authors:  Indrajit Das; Jérôme Désiré; Dinesh Manvar; Isabelle Baussanne; Virendra N Pandey; Jean-Luc Décout
Journal:  J Med Chem       Date:  2012-06-22       Impact factor: 7.446

3.  Toward targeting RNA structure: branched peptides as cell-permeable ligands to TAR RNA.

Authors:  David I Bryson; Wenyu Zhang; Patrick M McLendon; Theresa M Reineke; Webster L Santos
Journal:  ACS Chem Biol       Date:  2011-10-28       Impact factor: 5.100

4.  Characterization of TDP-4-keto-6-deoxy-D-glucose-3,4-ketoisomerase from the D-mycaminose biosynthetic pathway of Streptomyces fradiae: in vitro activity and substrate specificity studies.

Authors:  Charles E Melançon; Lin Hong; Jess A White; Yung-nan Liu; Hung-wen Liu
Journal:  Biochemistry       Date:  2007-01-16       Impact factor: 3.162

5.  Antibiotic inducibility of the MexXY multidrug efflux system of Pseudomonas aeruginosa: involvement of the antibiotic-inducible PA5471 gene product.

Authors:  Yuji Morita; Mara L Sobel; Keith Poole
Journal:  J Bacteriol       Date:  2006-03       Impact factor: 3.490

6.  Analyzing the flexibility of RNA structures by constraint counting.

Authors:  Simone Fulle; Holger Gohlke
Journal:  Biophys J       Date:  2008-02-15       Impact factor: 4.033

7.  Structure-guided discovery of novel aminoglycoside mimetics as antibacterial translation inhibitors.

Authors:  Yuefen Zhou; Vlad E Gregor; Zhongxiang Sun; Benjamin K Ayida; Geoffrey C Winters; Douglas Murphy; Klaus B Simonsen; Dionisios Vourloumis; Sarah Fish; Jamie M Froelich; Daniel Wall; Thomas Hermann
Journal:  Antimicrob Agents Chemother       Date:  2005-12       Impact factor: 5.191

Review 8.  Functional RNA structures throughout the Hepatitis C Virus genome.

Authors:  Rebecca L Adams; Nathan Pirakitikulr; Anna Marie Pyle
Journal:  Curr Opin Virol       Date:  2017-05-13       Impact factor: 7.090

Review 9.  Themes and variations in riboswitch structure and function.

Authors:  Alla Peselis; Alexander Serganov
Journal:  Biochim Biophys Acta       Date:  2014-02-28

10.  Structural basis for hygromycin B inhibition of protein biosynthesis.

Authors:  Maria A Borovinskaya; Shinichiro Shoji; Kurt Fredrick; Jamie H D Cate
Journal:  RNA       Date:  2008-06-20       Impact factor: 4.942

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