| Literature DB >> 15910022 |
Abstract
The reaction path is an important concept of theoretical chemistry. We use a projection operator for the following of the Newton trajectory (NT) along the reaction valley of the potential energy surface. We describe the numerical scheme for the string method, adapting the proposal of a growing string (GS) by [Peters et al.,J. Chem. Phys. 120, 7877 (2004)]. The combination of the Newton projector and the growing string idea is an improvement of both methods, and a great saving of the number of iterations needed to find the pathway over the saddle point. This combination GS-NT is at the best of our knowledge new. We employ two different corrector methods: first, the use of projected gradient steps, and second a conjugated gradient method, the CG+ method of Liu, Nocedal, and Waltz, generalized by projectors. The executed examples are Lennard-Jones clusters, LJ(7) and LJ(22), and an N-methyl-alanyl-acetamide (alanine dipeptide) rearrangement between the minima C7(ax) and C5. For the latter, the growing string calculation is interfaced with the GASSIAN03 quantum chemical software package.Entities:
Year: 2005 PMID: 15910022 DOI: 10.1063/1.1885467
Source DB: PubMed Journal: J Chem Phys ISSN: 0021-9606 Impact factor: 3.488