Literature DB >> 15909989

Interaction between the T4 helicase loading protein (gp59) and the DNA polymerase (gp43): unlocking of the gp59-gp43-DNA complex to initiate assembly of a fully functional replisome.

Jun Xi1, Zhiquan Zhang, Zhihao Zhuang, Jingsong Yang, Michelle M Spiering, Gordon G Hammes, Stephen J Benkovic.   

Abstract

Single-molecule fluorescence resonance energy transfer and functional assays have been used to study the initiation and regulation of the bacteriophage T4 DNA replication system. Previous work has demonstrated that a complex of the helicase loading protein (gp59) and the DNA polymerase (gp43) on forked DNA totally inhibits the polymerase and exonuclease activities of gp43 by a molecular locking mechanism (Xi, J., Zhuang, Z., Zhang, Z., Selzer, T., Spiering, M. M., Hammes, G. G., and Benkovic, S. J. (2005) Biochemistry 44, 2305-2318). We now show that this complex is "unlocked" by the addition of the helicase (gp41) with restoration of the DNA polymerase activity. Gp59 retains its ability to load the helicase while forming a gp59-gp43 complex at a DNA fork in the presence of the single-stranded DNA binding protein (gp32). Upon the addition of gp41 and MgATP, gp59 dissociates from the complex, and the DNA-bound gp41 is capable of recruiting the primase (gp61) to form a functional primosome and, subsequently, a fully active replisome. Functional assays of leading- and lagging-strand synthesis on an active replication fork show that the absence of gp59 has no effect on the coupling of leading- and lagging-strand synthesis or on the size of the Okazaki DNA fragments. We conclude that gp59 acts in a manner similar to the clamp loader to ensure proper assembly of the replisome and does not remain as a replisome component during active replication.

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Year:  2005        PMID: 15909989     DOI: 10.1021/bi047296w

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  17 in total

1.  Templated mutagenesis in bacteriophage T4 involving imperfect direct or indirect sequence repeats.

Authors:  Gary E Schultz; John W Drake
Journal:  Genetics       Date:  2008-02-01       Impact factor: 4.562

2.  Control of helicase loading in the coupled DNA replication and recombination systems of bacteriophage T4.

Authors:  Amy M Branagan; Jenny A Klein; Christian S Jordan; Scott W Morrical
Journal:  J Biol Chem       Date:  2013-12-14       Impact factor: 5.157

Review 3.  Break-induced DNA replication.

Authors:  Ranjith P Anand; Susan T Lovett; James E Haber
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-12-01       Impact factor: 10.005

Review 4.  Replication-fork dynamics.

Authors:  Karl E Duderstadt; Rodrigo Reyes-Lamothe; Antoine M van Oijen; David J Sherratt
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-01-01       Impact factor: 10.005

Review 5.  Isothermal DNA amplification in vitro: the helicase-dependent amplification system.

Authors:  Yong-Joo Jeong; Kkothanahreum Park; Dong-Eun Kim
Journal:  Cell Mol Life Sci       Date:  2009-07-24       Impact factor: 9.261

6.  Investigation of stoichiometry of T4 bacteriophage helicase loader protein (gp59).

Authors:  Sri Ranjini Arumugam; Tae-Hee Lee; Stephen J Benkovic
Journal:  J Biol Chem       Date:  2009-08-20       Impact factor: 5.157

7.  Mechanism of polymerase collision release from sliding clamps on the lagging strand.

Authors:  Roxana E Georgescu; Isabel Kurth; Nina Y Yao; Jelena Stewart; Olga Yurieva; Mike O'Donnell
Journal:  EMBO J       Date:  2009-08-20       Impact factor: 11.598

8.  RNA primer handoff in bacteriophage T4 DNA replication: the role of single-stranded DNA-binding protein and polymerase accessory proteins.

Authors:  Scott W Nelson; Ravindra Kumar; Stephen J Benkovic
Journal:  J Biol Chem       Date:  2008-05-28       Impact factor: 5.157

Review 9.  Insight into helicase mechanism and function revealed through single-molecule approaches.

Authors:  Jaya G Yodh; Michael Schlierf; Taekjip Ha
Journal:  Q Rev Biophys       Date:  2010-08-04       Impact factor: 5.318

Review 10.  Understanding DNA replication by the bacteriophage T4 replisome.

Authors:  Stephen J Benkovic; Michelle M Spiering
Journal:  J Biol Chem       Date:  2017-09-25       Impact factor: 5.157

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