Literature DB >> 15908234

Automated brain tissue assessment in the elderly and demented population: construction and validation of a sub-volume probabilistic brain atlas.

Michael S Mega1, Ivo D Dinov, John C Mazziotta, Mario Manese, Paul M Thompson, Chris Lindshield, Jacob Moussai, Nah Tran, Kirsten Olsen, Chris I Zoumalan, Roger P Woods, Arthur W Toga.   

Abstract

OBJECTIVES: To develop an automated imaging assessment tool that accommodates the anatomic variability of the elderly and demented population as well as the registration errors occurring during spatial normalization.
METHODS: 20 subjects with Alzheimer's disease (AD), mild cognitive impairment, or normal cognition underwent MRI brain imaging and had their 3D volumetric datasets manually partitioned into 68 regions of interest (ROI) termed sub-volumes. Gray matter (GM), white matter (WM), and cerebral spinal fluid (CSF) voxel counts were then made in the subject's native space for comparison against automated volumetric measures within three sub-volume probabilistic atlas (SVPA) models. The three SVPAs were constructed using 12 parameter affine (12 p), 2nd order (2nd), and 6th order (6th) transforms derived from registering the manually partitioned scans into a Talairach compatible AD population-based target. The three SVPA automated measures were compared to the manually derived measures in the 20 subjects' native space with a "jack-knife" procedure in which each subject was assessed by an SVPA they did not contribute toward constructing.
RESULTS: The mean left and right GM ratio (GM ratio = [GM + CSF] / CSF) "r values" for the 3 SVPAs compared to the manually derived ratios across the 68 ROIs were 0.85 for the 12p SVPA, 0.88 for the 2nd SVPA, and 0.89 for the 6th SVPA. The mean left and right WM ratio (WM ratio = [WM + CSF] / CSF) "r values" for the 3 SVPAs being 0.84 for the 12p SVPA, 0.86 for the 2nd SVPA, and 0.88 for the 6th SVPA.
CONCLUSION: We have constructed, from an elderly and demented cohort, an automated brain volumetric tool that has excellent accuracy compared to a manual gold standard and is capable of regional hypothesis testing and individual patient assessment compared to a population.

Entities:  

Mesh:

Year:  2005        PMID: 15908234     DOI: 10.1016/j.neuroimage.2005.03.031

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  25 in total

Review 1.  Structural brain atlases: design, rationale, and applications in normal and pathological cohorts.

Authors:  Pravat K Mandal; Rashima Mahajan; Ivo D Dinov
Journal:  J Alzheimers Dis       Date:  2012       Impact factor: 4.472

2.  A wavelet-based statistical analysis of FMRI data: I. motivation and data distribution modeling.

Authors:  Ivo D Dinov; John W Boscardin; Michael S Mega; Elizabeth L Sowell; Arthur W Toga
Journal:  Neuroinformatics       Date:  2005

3.  LONI visualization environment.

Authors:  Ivo D Dinov; Daniel Valentino; Bae Cheol Shin; Fotios Konstantinidis; Guogang Hu; Allan MacKenzie-Graham; Erh-Fang Lee; David Shattuck; Jeff Ma; Craig Schwartz; Arthur W Toga
Journal:  J Digit Imaging       Date:  2006-06       Impact factor: 4.056

4.  Construction of a 3D probabilistic atlas of human cortical structures.

Authors:  David W Shattuck; Mubeena Mirza; Vitria Adisetiyo; Cornelius Hojatkashani; Georges Salamon; Katherine L Narr; Russell A Poldrack; Robert M Bilder; Arthur W Toga
Journal:  Neuroimage       Date:  2007-11-26       Impact factor: 6.556

Review 5.  In praise of tedious anatomy.

Authors:  Joseph T Devlin; Russell A Poldrack
Journal:  Neuroimage       Date:  2007-10-01       Impact factor: 6.556

6.  What is where and why it is important.

Authors:  Arthur W Toga; Paul M Thompson
Journal:  Neuroimage       Date:  2007-02-21       Impact factor: 6.556

7.  Patterns of structural complexity in Alzheimer's disease and frontotemporal dementia.

Authors:  Karl Young; An-Tao Du; Joel Kramer; Howard Rosen; Bruce Miller; Michael Weiner; Norbert Schuff
Journal:  Hum Brain Mapp       Date:  2009-05       Impact factor: 5.038

8.  Graphical neuroimaging informatics: application to Alzheimer's disease.

Authors:  John Darrell Van Horn; Ian Bowman; Shantanu H Joshi; Vaughan Greer
Journal:  Brain Imaging Behav       Date:  2014-06       Impact factor: 3.978

9.  Effects of spatial transformation on regional brain volume estimates.

Authors:  John S Allen; Joel Bruss; Sonya Mehta; Thomas Grabowski; C Kice Brown; Hanna Damasio
Journal:  Neuroimage       Date:  2008-06-03       Impact factor: 6.556

10.  Automatic segmentation of the hippocampus and the amygdala driven by hybrid constraints: method and validation.

Authors:  M Chupin; A Hammers; R S N Liu; O Colliot; J Burdett; E Bardinet; J S Duncan; L Garnero; L Lemieux
Journal:  Neuroimage       Date:  2009-02-21       Impact factor: 6.556

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