Literature DB >> 15905300

First nuclear DNA amounts in more than 300 angiosperms.

B J M Zonneveld1, I J Leitch, M D Bennett.   

Abstract

BACKGROUND AND AIMS: Genome size (DNA C-value) data are key biodiversity characters of fundamental significance used in a wide variety of biological fields. Since 1976, Bennett and colleagues have made scattered published and unpublished genome size data more widely accessible by assembling them into user-friendly compilations. Initially these were published as hard copy lists, but since 1997 they have also been made available electronically (see the Plant DNA C-values database http://www.kew.org/cval/homepage.html). Nevertheless, at the Second Plant Genome Size Meeting in 2003, Bennett noted that as many as 1000 DNA C-value estimates were still unpublished and hence unavailable. Scientists were strongly encouraged to communicate such unpublished data. The present work combines the databasing experience of the Kew-based authors with the unpublished C-values produced by Zonneveld to make a large body of valuable genome size data available to the scientific community.
METHODS: C-values for angiosperm species, selected primarily for their horticultural interest, were estimated by flow cytometry using the fluorochrome propidium iodide. The data were compiled into a table whose form is similar to previously published lists of DNA amounts by Bennett and colleagues. KEY RESULTS AND
CONCLUSIONS: The present work contains C-values for 411 taxa including first values for 308 species not listed previously by Bennett and colleagues. Based on a recent estimate of the global published output of angiosperm DNA C-value data (i.e. 200 first C-value estimates per annum) the present work equals 1.5 years of average global published output; and constitutes over 12 % of the latest 5-year global target set by the Second Plant Genome Size Workshop (see http://www.kew.org/cval/workshopreport.html). Hopefully, the present example will encourage others to unveil further valuable data which otherwise may lie forever unpublished and unavailable for comparative analyses.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15905300      PMCID: PMC4246870          DOI: 10.1093/aob/mci170

Source DB:  PubMed          Journal:  Ann Bot        ISSN: 0305-7364            Impact factor:   4.357


  8 in total

Review 1.  Nuclear dna amounts in angiosperms.

Authors:  M D Bennett; J B Smith
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1976-05-27       Impact factor: 6.237

2.  Nuclear DNA content estimates in multicellular green, red and brown algae: phylogenetic considerations.

Authors:  Donald F Kapraun
Journal:  Ann Bot       Date:  2005-01       Impact factor: 4.357

Review 3.  The large genome constraint hypothesis: evolution, ecology and phenotype.

Authors:  Charles A Knight; Nicole A Molinari; Dmitri A Petrov
Journal:  Ann Bot       Date:  2005-01       Impact factor: 4.357

Review 4.  Plant genome size research: a field in focus.

Authors:  M D Bennett; I J Leitch
Journal:  Ann Bot       Date:  2005-01       Impact factor: 4.357

5.  Genome evolution in the genus Sorghum (Poaceae).

Authors:  H James Price; Sally L Dillon; George Hodnett; William L Rooney; Larry Ross; J Spencer Johnston
Journal:  Ann Bot       Date:  2005-01       Impact factor: 4.357

6.  Evolution of DNA amounts across land plants (embryophyta).

Authors:  I J Leitch; D E Soltis; P S Soltis; M D Bennett
Journal:  Ann Bot       Date:  2005-01       Impact factor: 4.357

Review 7.  Nuclear DNA amounts in angiosperms: progress, problems and prospects.

Authors:  M D Bennett; I J Leitch
Journal:  Ann Bot       Date:  2005-01       Impact factor: 4.357

8.  Evolution of genome size in the angiosperms.

Authors:  Douglas E Soltis; Pamela S Soltis; Michael D Bennett; Ilia J Leitch
Journal:  Am J Bot       Date:  2003-11       Impact factor: 3.844

  8 in total
  54 in total

1.  Random BAC FISH of monocot plants reveals differential distribution of repetitive DNA elements in small and large chromosome species.

Authors:  Go Suzuki; Yuka Ogaki; Nozomi Hokimoto; Lin Xiao; Akie Kikuchi-Taura; Chiaki Harada; Ryozo Okayama; Asami Tsuru; Misa Onishi; Naoko Saito; Geum Sook Do; Sun Hee Lee; Takuro Ito; Akira Kanno; Maki Yamamoto; Yasuhiko Mukai
Journal:  Plant Cell Rep       Date:  2011-11-09       Impact factor: 4.570

2.  Genome change in wheat observed through the structure and expression of α/β-gliadin genes.

Authors:  K Kawaura; J Wu; T Matsumoto; H Kanamori; S Katagiri; Y Ogihara
Journal:  Funct Integr Genomics       Date:  2012-02-28       Impact factor: 3.410

Review 3.  Sexual and apomictic plant reproduction in the genomics era: exploring the mechanisms potentially useful in crop plants.

Authors:  Sangam L Dwivedi; Enrico Perotti; Hari D Upadhyaya; Rodomiro Ortiz
Journal:  Sex Plant Reprod       Date:  2010-05-28

4.  Diverse retrotransposon families and an AT-rich satellite DNA revealed in giant genomes of Fritillaria lilies.

Authors:  Katerina Ambrozová; Terezie Mandáková; Petr Bures; Pavel Neumann; Ilia J Leitch; Andrea Koblízková; Jirí Macas; Martin A Lysak
Journal:  Ann Bot       Date:  2010-12-14       Impact factor: 4.357

5.  Flow cytometry confirms reticulate evolution and reveals triploidy in Central European Diphasiastrum taxa (Lycopodiaceae, Lycophyta).

Authors:  H Wilfried Bennert; Karsten Horn; Marion Kauth; Jörg Fuchs; Iben Sophie Bisgaard Jakobsen; Benjamin Ollgaard; Martin Schnittler; Matthias Steinberg; Ronnie Viane
Journal:  Ann Bot       Date:  2011-08-10       Impact factor: 4.357

6.  Two new nuclear isolation buffers for plant DNA flow cytometry: a test with 37 species.

Authors:  João Loureiro; Eleazar Rodriguez; Jaroslav Dolezel; Conceição Santos
Journal:  Ann Bot       Date:  2007-08-07       Impact factor: 4.357

7.  Chromosome diversity and evolution in Liliaceae.

Authors:  L Peruzzi; I J Leitch; K F Caparelli
Journal:  Ann Bot       Date:  2008-11-25       Impact factor: 4.357

8.  Demography and weak selection drive patterns of transposable element diversity in natural populations of Arabidopsis lyrata.

Authors:  Steven Lockton; Jeffrey Ross-Ibarra; Brandon S Gaut
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-04       Impact factor: 11.205

9.  The chromosome number, karyotype and genome size of the desert plant diploid Reaumuria soongorica (Pall.) Maxim.

Authors:  Xiaohua Wang; Tao Zhang; Zengnan Wen; Honglang Xiao; Zujun Yang; Guoxiong Chen; Xin Zhao
Journal:  Plant Cell Rep       Date:  2011-02-15       Impact factor: 4.570

10.  C-value reassessment of plant standards: an image cytometry approach.

Authors:  Milene Miranda Praça-Fontes; Carlos Roberto Carvalho; Wellington Ronildo Clarindo
Journal:  Plant Cell Rep       Date:  2011-08-18       Impact factor: 4.570

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.