Literature DB >> 15889889

Dissociation of ligand-receptor complexes using magnetic tweezers.

Claudia Danilowicz1, Derek Greenfield, Mara Prentiss.   

Abstract

We present a new tool for measuring ligand-receptor complex bonds at the single-molecule level using magnetic tweezers. Our apparatus allows massively parallel (100-1000) measurements on many single complexes perturbed by constant forces. Compared to other single-molecule techniques, our method is simple, inexpensive, robust, and widely compatible with other techniques. We immobilized specific receptor molecules on the surface of superparamagnetic beads and corresponding ligand molecules on a fixed surface. The beads were allowed to contact the surface so that ligand-receptor binding occurred. A permanent magnet then generated a constant force that pulled the receptors away from the ligands. The rates at which bound species separated at various forces allowed us to characterize the potential energy landscape of the bond and extrapolate bulk solution kinetic rates and transition-state distances. These values agreed with those obtained using bulk and single-molecule methods.

Year:  2005        PMID: 15889889     DOI: 10.1021/ac050057+

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  13 in total

1.  Focal Adhesion Induction at the Tip of a Functionalized Nanoelectrode.

Authors:  Daniela E Fuentes; Chilman Bae; Peter J Butler
Journal:  Cell Mol Bioeng       Date:  2011-12       Impact factor: 2.321

2.  Massively parallel single-molecule manipulation using centrifugal force.

Authors:  Ken Halvorsen; Wesley P Wong
Journal:  Biophys J       Date:  2010-06-02       Impact factor: 4.033

3.  Conformational dynamics accompanying the proteolytic degradation of trimeric collagen I by collagenases.

Authors:  Arjun S Adhikari; Emerson Glassey; Alexander R Dunn
Journal:  J Am Chem Soc       Date:  2012-08-01       Impact factor: 15.419

4.  Resolving two-dimensional kinetics of the integrin αIIbβ3-fibrinogen interactions using binding-unbinding correlation spectroscopy.

Authors:  Rustem I Litvinov; Andrey Mekler; Henry Shuman; Joel S Bennett; Valeri Barsegov; John W Weisel
Journal:  J Biol Chem       Date:  2012-08-14       Impact factor: 5.157

Review 5.  Single-molecule force spectroscopy: optical tweezers, magnetic tweezers and atomic force microscopy.

Authors:  Keir C Neuman; Attila Nagy
Journal:  Nat Methods       Date:  2008-06       Impact factor: 28.547

6.  Multiplexed single-molecule force proteolysis measurements using magnetic tweezers.

Authors:  Arjun S Adhikari; Jack Chai; Alexander R Dunn
Journal:  J Vis Exp       Date:  2012-07-25       Impact factor: 1.355

7.  Quantitative modeling of forces in electromagnetic tweezers.

Authors:  Alex Bijamov; Fridon Shubitidze; Piercen M Oliver; Dmitri V Vezenov
Journal:  J Appl Phys       Date:  2010-11-18       Impact factor: 2.546

8.  Single-Bond Association Kinetics Determined by Tethered Particle Motion: Concept and Simulations.

Authors:  Koen E Merkus; Menno W J Prins; Cornelis Storm
Journal:  Biophys J       Date:  2016-10-18       Impact factor: 4.033

9.  High density single-molecule-bead arrays for parallel single molecule force spectroscopy.

Authors:  Michael J Barrett; Piercen M Oliver; Peng Cheng; Deniz Cetin; Dmitri Vezenov
Journal:  Anal Chem       Date:  2012-05-15       Impact factor: 6.986

10.  Magnetic forces and DNA mechanics in multiplexed magnetic tweezers.

Authors:  Iwijn De Vlaminck; Thomas Henighan; Marijn T J van Loenhout; Daniel R Burnham; Cees Dekker
Journal:  PLoS One       Date:  2012-08-03       Impact factor: 3.240

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